RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 COL4A1P02462 1669 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 UQCRFS1P1P0C7P4 283 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 FGFR2P21802 821 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
SNX11-206ENST00000580219 PTH1RQ03431 593 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 LARGE2Q8N3Y3 721 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 LPIN2Q92539 896 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 INTS4Q96HW7 963 aaKnown RBP11.72□□□□□ -0.53
SNX11-206ENST00000580219 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
SNX11-206ENST00000580219 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
SNX11-206ENST00000580219 TMEM265A0A087WTH1 108 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 GOLIM4O00461 696 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 TAF5LO75529 589 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 SLC5A1P13866 664 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 NPR1P16066 1061 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 PSMA5P28066 241 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 ARID4AP29374 1257 aaPredicted RBP11.71□□□□□ -0.53
SNX11-206ENST00000580219 ADORA1P30542 326 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 GMPSP49915 693 aaPredicted RBP11.71□□□□□ -0.53
SNX11-206ENST00000580219 CUL4AQ13619 759 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 KRT32Q14532 448 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
SNX11-206ENST00000580219 ZMYM1Q5SVZ6 1142 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.53
SNX11-206ENST00000580219 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
SNX11-206ENST00000580219 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 TAF1P21675 1872 aa11.71□□□□□ -0.53
SNX11-206ENST00000580219 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
SNX11-206ENST00000580219 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
SNX11-206ENST00000580219 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
SNX11-206ENST00000580219 KCNJ4P48050 445 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 NUCB2P80303 420 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 RAB3GAP1Q15042 981 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 CREB3L3Q68CJ9 461 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 KRT26Q7Z3Y9 468 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 RPGRQ92834 1020 aaKnown RBP11.7□□□□□ -0.54
SNX11-206ENST00000580219 TTC14Q96N46 770 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
SNX11-206ENST00000580219 ADM5C9JUS6 153 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 SLC27A2O14975 620 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 VPS53Q5VIR6 699 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 ZNF589Q86UQ0 364 aaPredicted RBP11.69□□□□□ -0.54
SNX11-206ENST00000580219 NIM1KQ8IY84 436 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 CELF1Q92879 486 aaKnown RBP11.69□□□□□ -0.54
SNX11-206ENST00000580219 RBM17Q96I25 401 aaKnown RBP11.69□□□□□ -0.54
SNX11-206ENST00000580219 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 ZNF333Q96JL9 665 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 CRAMP1Q96RY5 1269 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNX11-206ENST00000580219 ALDH8A1Q9H2A2 487 aaPredicted RBP11.69□□□□□ -0.54
SNX11-206ENST00000580219 CDH23Q9H251 3354 aa11.69□□□□□ -0.54
SNX11-206ENST00000580219 PTMSP20962 102 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 GRAPQ13588 217 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 ANKRD18AQ8IVF6 992 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
SNX11-206ENST00000580219 UPF3BQ9BZI7 483 aaKnown RBP11.68□□□□□ -0.54
SNX11-206ENST00000580219 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 BSDC1Q9NW68 430 aaPredicted RBP11.68□□□□□ -0.54
SNX11-206ENST00000580219 CYP46A1Q9Y6A2 500 aa11.68□□□□□ -0.54
SNX11-206ENST00000580219 RPTORQ8N122 1335 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 LRRC37AA6NMS7 1700 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 WTIPA6NIX2 430 aaPredicted RBP11.67□□□□□ -0.54
SNX11-206ENST00000580219 FRAT2O75474 233 aaPredicted RBP11.67□□□□□ -0.54
SNX11-206ENST00000580219 CASTP20810 708 aaKnown RBP11.67□□□□□ -0.54
SNX11-206ENST00000580219 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 ANKRD1Q15327 319 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 APPBP2Q92624 585 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
SNX11-206ENST00000580219 JAKMIP1Q96N16 626 aaKnown RBP11.67□□□□□ -0.54
SNX11-206ENST00000580219 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 CFHR5Q9BXR6 569 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 SH2B1Q9NRF2 756 aaPredicted RBP11.67□□□□□ -0.54
SNX11-206ENST00000580219 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 A0A1B0GUL6 1792 aa11.67□□□□□ -0.54
SNX11-206ENST00000580219 MAST3O60307 1309 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
SNX11-206ENST00000580219 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
SNX11-206ENST00000580219 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 MCM4P33991 863 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 MCAMP43121 646 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 ZAP70P43403 619 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 TM4SF4P48230 202 aa11.66□□□□□ -0.54
SNX11-206ENST00000580219 RPS8P62241 208 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms