RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 LAMB1P07942 1786 aa19.03■□□□□ 0.64
CSNK1D-212ENST00000580061 TCP10L2B9ZVM9 353 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 ENTPD3O75355 529 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 APPP05067 770 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 PTH1RQ03431 593 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 FAM83AQ86UY5 434 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 OSBPL5Q9H0X9 879 aaPredicted RBP19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 GPBP1L1Q9HC44 474 aaPredicted RBP19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 ANO2Q9NQ90 1003 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 CNTNAP1P78357 1384 aa19.02■□□□□ 0.64
CSNK1D-212ENST00000580061 LAMA4Q16363 1823 aa19.02■□□□□ 0.63
CSNK1D-212ENST00000580061 REC8O95072 547 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 POTEIP0CG38 1075 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 POTEJP0CG39 1038 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 YY1P25490 414 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 TNNI2P48788 182 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 TCP10Q12799 353 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 TNFAIP1Q13829 316 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 ALX1Q15699 326 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 FAM151AQ8WW52 585 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 NACAP1Q9BZK3 213 aa19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 COL2A1P02458 1487 aaPredicted RBP19.01■□□□□ 0.63
CSNK1D-212ENST00000580061 ZMYM6O95789 1325 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 EIF5BO60841 1220 aaKnown RBP19■□□□□ 0.63
CSNK1D-212ENST00000580061 SEC24BO95487 1268 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 FGAP02671 866 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 MAP4K1Q92918 833 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 DCPSQ96C86 337 aaKnown RBP19■□□□□ 0.63
CSNK1D-212ENST00000580061 DDRGK1Q96HY6 314 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 NAPBQ9H115 298 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 SCAF8Q9UPN6 1271 aaKnown RBP19■□□□□ 0.63
CSNK1D-212ENST00000580061 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 SIPA1L1O43166 1804 aa19■□□□□ 0.63
CSNK1D-212ENST00000580061 TDO2P48775 406 aa18.99■□□□□ 0.63
CSNK1D-212ENST00000580061 RASA3Q14644 834 aa18.99■□□□□ 0.63
CSNK1D-212ENST00000580061 LDHDQ86WU2 507 aa18.99■□□□□ 0.63
CSNK1D-212ENST00000580061 MCM9Q9NXL9 1143 aa18.99■□□□□ 0.63
CSNK1D-212ENST00000580061 ATRNL1Q5VV63 1379 aa18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 SBK1Q52WX2 424 aa18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 SH3BP5LQ7L8J4 393 aa18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 BACH2Q9BYV9 841 aa18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 DEFB129Q9H1M3 183 aa18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 ARPP21Q9UBL0 812 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 SAP30BPQ9UHR5 308 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-212ENST00000580061 USP17L12C9JPN9 530 aa18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 USP17L21D6R901 530 aa18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 SULF1Q8IWU6 871 aa18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 TMEM39BQ9GZU3 492 aa18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 DHX36Q9H2U1 1008 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 PALD1Q9ULE6 856 aa18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 PPP2R3BQ9Y5P8 575 aa18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 RBM8AQ9Y5S9 174 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-212ENST00000580061 DDTLA6NHG4 134 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 KIF3CO14782 793 aa18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 C12orf60Q5U649 245 aa18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 KRT26Q7Z3Y9 468 aa18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 TEPSINQ96N21 525 aa18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 CTNNA3Q9UI47 895 aa18.96■□□□□ 0.63
CSNK1D-212ENST00000580061 CYP2D7A0A087X1C5 515 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 ADM5C9JUS6 153 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 POLR3DP05423 398 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 CYP2D6P10635 497 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 PLCD1P51178 756 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 NECTIN1Q15223 517 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 SLC4A8Q2Y0W8 1093 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 MAP1SQ66K74 1059 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 CDC37L1Q7L3B6 337 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 TTC6Q86TZ1 520 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 ZSCAN29Q8IWY8 852 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 CDAN1Q8IWY9 1227 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 AMOTL1Q8IY63 956 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 ZNF784Q8NCA9 323 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 MYH8P13535 1937 aa18.95■□□□□ 0.62
CSNK1D-212ENST00000580061 MINDY4BA8MYZ0 360 aa18.94■□□□□ 0.62
CSNK1D-212ENST00000580061 EVX2Q03828 476 aa18.94■□□□□ 0.62
CSNK1D-212ENST00000580061 USP48Q86UV5 1035 aa18.94■□□□□ 0.62
CSNK1D-212ENST00000580061 CSRNP1Q96S65 589 aa18.94■□□□□ 0.62
CSNK1D-212ENST00000580061 GLIS2Q9BZE0 524 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-212ENST00000580061 PI4KBQ9UBF8 816 aa18.94■□□□□ 0.62
CSNK1D-212ENST00000580061 SMIM22K7EJ46 135 aa18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 ZNF213O14771 459 aa18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 HLA-DOAP06340 250 aa18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 PPARAQ07869 468 aa18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 IMMTQ16891 758 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 ANAPC4Q9UJX5 808 aa18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 ROBO3Q96MS0 1386 aa18.93■□□□□ 0.62
CSNK1D-212ENST00000580061 CYP21A2P08686 494 aa18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 HAND2P61296 217 aa18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 NBPF12Q5TAG4 269 aaPredicted RBP18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 PRAMEF18Q5VWM3 479 aa18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 CHADLQ6NUI6 762 aa18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 DLK2Q6UY11 383 aa18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 EHD4Q9H223 541 aa18.92■□□□□ 0.62
CSNK1D-212ENST00000580061 SSC5DA1L4H1 1573 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms