RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SCYL3Q8IZE3 742 aa17.53■□□□□ 0.4
CSNK1D-211ENST00000579316 PUS3Q9BZE2 481 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-211ENST00000579316 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
CSNK1D-211ENST00000579316 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
CSNK1D-211ENST00000579316 ZHX2Q9Y6X8 837 aa17.53■□□□□ 0.4
CSNK1D-211ENST00000579316 PFASO15067 1338 aa17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 GRM8O00222 908 aa17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 PTPRAP18433 802 aa17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 NFIAQ12857 509 aa17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 CAVIN4Q5BKX8 364 aa17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 HMX1Q9NP08 348 aaPredicted RBP17.52■□□□□ 0.4
CSNK1D-211ENST00000579316 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 COL6A1P12109 1028 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 TCP10Q12799 353 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 CDC42EP5Q6NZY7 148 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 GADL1Q6ZQY3 521 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 PICK1Q9NRD5 415 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 CDH23Q9H251 3354 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
CSNK1D-211ENST00000579316 PHIPQ8WWQ0 1821 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 VGLL2Q8N8G2 317 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 FAM198AQ9UFP1 575 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 GJD2Q9UKL4 321 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
CSNK1D-211ENST00000579316 DOCK2Q92608 1830 aa17.49■□□□□ 0.39
CSNK1D-211ENST00000579316 TRIM32Q13049 653 aa17.49■□□□□ 0.39
CSNK1D-211ENST00000579316 MAP3K21Q5TCX8 1036 aa17.49■□□□□ 0.39
CSNK1D-211ENST00000579316 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
CSNK1D-211ENST00000579316 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
CSNK1D-211ENST00000579316 DOCK1Q14185 1865 aa17.48■□□□□ 0.39
CSNK1D-211ENST00000579316 F6X3S4 739 aa17.47■□□□□ 0.39
CSNK1D-211ENST00000579316 PDE8BO95263 885 aa17.47■□□□□ 0.39
CSNK1D-211ENST00000579316 KAZALD1Q96I82 304 aa17.47■□□□□ 0.39
CSNK1D-211ENST00000579316 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
CSNK1D-211ENST00000579316 RFX7Q2KHR2 1363 aa17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 GCLCP48506 637 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 MDM2Q00987 491 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 ZNF697Q5TEC3 545 aa17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 ZFPM1Q8IX07 1006 aa17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 MAFAQ8NHW3 353 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 WDR66Q8TBY9 1149 aa17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 TRIB2Q92519 343 aa17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 FAM161BQ96MY7 647 aa17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 CDX2Q99626 313 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
CSNK1D-211ENST00000579316 DNAH12Q6ZR08 3092 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 LRRC26Q2I0M4 334 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 TREML2Q5T2D2 321 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 PROCA1Q8NCQ7 364 aaPredicted RBP17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 LOC285556D6RIA3 1793 aa17.45■□□□□ 0.38
CSNK1D-211ENST00000579316 ENTPD3O75355 529 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 ALDH1L1O75891 902 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 FGFR2P21802 821 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 SYMPKQ92797 1274 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 IDI2Q9BXS1 227 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 USP40Q9NVE5 1235 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 MYH13Q9UKX3 1938 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 IL16Q14005 1332 aa17.44■□□□□ 0.38
CSNK1D-211ENST00000579316 XRCC5P13010 732 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-211ENST00000579316 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-211ENST00000579316 SH3BP5LQ7L8J4 393 aa17.43■□□□□ 0.38
CSNK1D-211ENST00000579316 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
CSNK1D-211ENST00000579316 LRRFIP2Q9Y608 721 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-211ENST00000579316 MAST2Q6P0Q8 1798 aa17.43■□□□□ 0.38
CSNK1D-211ENST00000579316 VAMP4O75379 141 aa17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 COL9A1P20849 921 aa17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 RGS3P49796 1198 aa17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 LHX8Q68G74 356 aa17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 MORF4L1Q9UBU8 362 aa17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 NCOR1O75376 2440 aa17.42■□□□□ 0.38
CSNK1D-211ENST00000579316 IFIT1P09914 478 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-211ENST00000579316 PRDX5P30044 214 aa17.41■□□□□ 0.38
CSNK1D-211ENST00000579316 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
CSNK1D-211ENST00000579316 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
CSNK1D-211ENST00000579316 UTYO14607 1347 aa17.41■□□□□ 0.38
CSNK1D-211ENST00000579316 PABPC4Q13310 644 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSNK1D-211ENST00000579316 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-211ENST00000579316 LBHD1Q9BQE6 289 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-211ENST00000579316 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-211ENST00000579316 SALL1Q9NSC2 1324 aa17.4■□□□□ 0.38
CSNK1D-211ENST00000579316 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
CSNK1D-211ENST00000579316 CCDC84Q86UT8 332 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-211ENST00000579316 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
CSNK1D-211ENST00000579316 SOCS4Q8WXH5 440 aa17.39■□□□□ 0.37
CSNK1D-211ENST00000579316 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
CSNK1D-211ENST00000579316 LTBP2Q14767 1821 aa17.39■□□□□ 0.37
CSNK1D-211ENST00000579316 DDTLA6NHG4 134 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms