RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
SMG8-203ENST00000578922 NOL10Q9BSC4 688 aaKnown RBP23.78■■□□□ 1.4
SMG8-203ENST00000578922 JAK2O60674 1132 aa23.77■■□□□ 1.4
SMG8-203ENST00000578922 LDHCP07864 332 aa23.77■■□□□ 1.4
SMG8-203ENST00000578922 SYT1P21579 422 aa23.77■■□□□ 1.4
SMG8-203ENST00000578922 CERS5Q8N5B7 392 aa23.77■■□□□ 1.4
SMG8-203ENST00000578922 ZSWIM5Q9P217 1185 aa23.77■■□□□ 1.4
SMG8-203ENST00000578922 MYH2Q9UKX2 1941 aa23.77■■□□□ 1.4
SMG8-203ENST00000578922 KLF18A0A0U1RQI7 1052 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 PFKFB2O60825 505 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 PPFIA3O75145 1194 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 BAG3O95817 575 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 PDIA3P30101 505 aaKnown RBP23.76■■□□□ 1.39
SMG8-203ENST00000578922 BTDP43251 543 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 TTLL6Q8N841 843 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 RTFDC1Q9BY42 306 aaPredicted RBP23.76■■□□□ 1.39
SMG8-203ENST00000578922 CYP2D6P10635 497 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 USP5P45974 858 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 AOC3Q16853 763 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 FOXD4L6Q3SYB3 417 aaPredicted RBP23.76■■□□□ 1.39
SMG8-203ENST00000578922 TMED8Q6PL24 325 aaPredicted RBP23.76■■□□□ 1.39
SMG8-203ENST00000578922 FOXD4L3Q6VB84 417 aaPredicted RBP23.76■■□□□ 1.39
SMG8-203ENST00000578922 GPT2Q8TD30 523 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 CNNM2Q9H8M5 875 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 SENP2Q9HC62 589 aa23.76■■□□□ 1.39
SMG8-203ENST00000578922 HS1BP3Q53T59 392 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 ZKSCAN3Q9BRR0 538 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 KRT23Q9C075 422 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 PPP1R1BQ9UD71 204 aaPredicted RBP23.75■■□□□ 1.39
SMG8-203ENST00000578922 TIAM2Q8IVF5 1701 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 PRDM1O75626 825 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 KCNA3P22001 575 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 GIMAP6Q6P9H5 292 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 FBXL16Q8N461 479 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 DDX11Q96FC9 970 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 ATP8A2Q9NTI2 1148 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 MCM9Q9NXL9 1143 aa23.75■■□□□ 1.39
SMG8-203ENST00000578922 WDR19Q8NEZ3 1342 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 STX6O43752 255 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 USP17L8P0C7I0 530 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 TGFBRAP1Q8WUH2 860 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 ZNF274Q96GC6 653 aaPredicted RBP23.74■■□□□ 1.39
SMG8-203ENST00000578922 RNF41Q9H4P4 317 aaPredicted RBP23.74■■□□□ 1.39
SMG8-203ENST00000578922 ANGEL1Q9UNK9 670 aaKnown RBP23.74■■□□□ 1.39
SMG8-203ENST00000578922 GOLGA8BA8MQT2 603 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 SH2B2O14492 632 aaPredicted RBP23.74■■□□□ 1.39
SMG8-203ENST00000578922 ECE2O60344 883 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 ANAPC4Q9UJX5 808 aa23.74■■□□□ 1.39
SMG8-203ENST00000578922 WDR33Q9C0J8 1336 aaKnown RBP23.73■■□□□ 1.39
SMG8-203ENST00000578922 POLD1P28340 1107 aa23.73■■□□□ 1.39
SMG8-203ENST00000578922 TMEM67Q5HYA8 995 aa23.73■■□□□ 1.39
SMG8-203ENST00000578922 PSDA5PKW4 1024 aaPredicted RBP23.72■■□□□ 1.39
SMG8-203ENST00000578922 IFIT3O14879 490 aaKnown RBP23.72■■□□□ 1.39
SMG8-203ENST00000578922 IGSF3O75054 1194 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 SCNN1DP51172 638 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 PPP4CP60510 307 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 MAPKAPK5Q8IW41 473 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 KLHL34Q8N239 644 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 MTFR1LQ9H019 292 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 TTF2Q9UNY4 1162 aaKnown RBP23.72■■□□□ 1.39
SMG8-203ENST00000578922 KIAA1551Q9HCM1 1747 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 VPS37CA5D8V6 355 aaPredicted RBP23.72■■□□□ 1.39
SMG8-203ENST00000578922 LARP1BQ659C4 914 aaKnown RBP23.72■■□□□ 1.39
SMG8-203ENST00000578922 PODNQ7Z5L7 613 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 IGDCC4Q8TDY8 1250 aa23.72■■□□□ 1.39
SMG8-203ENST00000578922 UPF1Q92900 1129 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMG8-203ENST00000578922 NAP1L5Q96NT1 182 aaPredicted RBP23.72■■□□□ 1.39
SMG8-203ENST00000578922 GPR75-ASB3A0A0A6YYF3 556 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 EVCP57679 992 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 NFXL1Q6ZNB6 911 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 ZSCAN30Q86W11 494 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 RXRAP19793 462 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 LRSAM1Q6UWE0 723 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 SLF2Q8IX21 1173 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 TEX11Q8IYF3 940 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 TMEM87BQ96K49 555 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 SAP30BPQ9UHR5 308 aaKnown RBP23.71■■□□□ 1.39
SMG8-203ENST00000578922 HPS5Q9UPZ3 1129 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 DAGLAQ9Y4D2 1042 aa23.71■■□□□ 1.39
SMG8-203ENST00000578922 PPIP5K2O43314 1243 aa23.7■■□□□ 1.38
SMG8-203ENST00000578922 RANBP6O60518 1105 aaKnown RBP23.7■■□□□ 1.38
SMG8-203ENST00000578922 CC2D2BQ6DHV5 1058 aa23.7■■□□□ 1.38
SMG8-203ENST00000578922 NSUN7Q8NE18 718 aaKnown RBP23.7■■□□□ 1.38
SMG8-203ENST00000578922 LY9Q9HBG7 655 aa23.7■■□□□ 1.38
SMG8-203ENST00000578922 ARPP21Q9UBL0 812 aaPredicted RBP23.7■■□□□ 1.38
SMG8-203ENST00000578922 SNED1Q8TER0 1413 aa23.7■■□□□ 1.38
SMG8-203ENST00000578922 ZSCAN22P10073 491 aaPredicted RBP23.69■■□□□ 1.38
SMG8-203ENST00000578922 DLEC1Q9Y238 1755 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 PTPDC1A2A3K4 754 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 CCDC93Q567U6 631 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 ESR2Q92731 530 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 PDLIM2Q96JY6 352 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 MYL10Q9BUA6 226 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 RBSNQ9H1K0 784 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 MKRN1Q9UHC7 482 aaKnown RBP23.69■■□□□ 1.38
SMG8-203ENST00000578922 GAKO14976 1311 aa23.69■■□□□ 1.38
SMG8-203ENST00000578922 FOSBP53539 338 aa23.68■■□□□ 1.38
SMG8-203ENST00000578922 KIAA2012Q0VF49 1180 aa23.68■■□□□ 1.38
SMG8-203ENST00000578922 CCDC144CPQ8IYA2 1237 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms