RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	HOOK2	Q96ED9	719 aa		28.66	■■■□□ 2.18
ERBB2-209	ENST00000578709	AK9	Q5TCS8	1911 aa		28.66	■■■□□ 2.18
ERBB2-209	ENST00000578709	RNF113A	O15541	343 aa	Known RBP	28.65	■■■□□ 2.18
ERBB2-209	ENST00000578709	PPP1R12B	O60237	982 aa	Predicted RBP	28.65	■■■□□ 2.18
ERBB2-209	ENST00000578709	DEFB115	Q30KQ5	88 aa		28.65	■■■□□ 2.18
ERBB2-209	ENST00000578709	MOB2	Q70IA6	237 aa		28.65	■■■□□ 2.18
ERBB2-209	ENST00000578709	ARMC9	Q7Z3E5	817 aa		28.65	■■■□□ 2.18
ERBB2-209	ENST00000578709	ATRNL1	Q5VV63	1379 aa		28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	TTLL12	Q14166	644 aa	Predicted RBP	28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	SH3BP5L	Q7L8J4	393 aa		28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	TICAM2	Q86XR7	235 aa		28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	TGFBRAP1	Q8WUH2	860 aa		28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	FSD1	Q9BTV5	496 aa		28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	OSBPL5	Q9H0X9	879 aa	Predicted RBP	28.64	■■■□□ 2.18
ERBB2-209	ENST00000578709	ANGEL1	Q9UNK9	670 aa	Known RBP	28.63	■■■□□ 2.17
ERBB2-209	ENST00000578709	FLT1	P17948	1338 aa		28.63	■■■□□ 2.17
ERBB2-209	ENST00000578709	DDTL	A6NHG4	134 aa	Predicted RBP	28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	UBE2Q2L	H0YL09	131 aa		28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	USP2	O75604	605 aa	Predicted RBP	28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	PRKG1	Q13976	671 aa		28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	LDLRAD1	Q5T700	205 aa		28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	APPBP2	Q92624	585 aa		28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	MKRN1	Q9UHC7	482 aa	Known RBP	28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	FZD1	Q9UP38	647 aa		28.62	■■■□□ 2.17
ERBB2-209	ENST00000578709	MAPKAPK5	Q8IW41	473 aa		28.61	■■■□□ 2.17
ERBB2-209	ENST00000578709	LCORL	Q8N3X6	602 aa		28.61	■■■□□ 2.17
ERBB2-209	ENST00000578709	KLRG1	Q96E93	195 aa		28.61	■■■□□ 2.17
ERBB2-209	ENST00000578709	CSRNP1	Q96S65	589 aa		28.61	■■■□□ 2.17
ERBB2-209	ENST00000578709	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.61	■■■□□ 2.17
ERBB2-209	ENST00000578709	PUS7L	Q9H0K6	701 aa	Known RBP	28.61	■■■□□ 2.17
ERBB2-209	ENST00000578709	UNCX	A6NJT0	531 aa		28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	MBD4	O95243	580 aa		28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	IREB2	P48200	963 aa	Known RBP	28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	DCAF15	Q66K64	600 aa		28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	ARMT1	Q9H993	441 aa		28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	PPP4R2	Q9NY27	417 aa		28.6	■■■□□ 2.17
ERBB2-209	ENST00000578709	RGMB	Q6NW40	437 aa		28.59	■■■□□ 2.17
ERBB2-209	ENST00000578709	OSBP2	Q969R2	916 aa		28.59	■■■□□ 2.17
ERBB2-209	ENST00000578709	DHX36	Q9H2U1	1008 aa	Known RBP	28.59	■■■□□ 2.17
ERBB2-209	ENST00000578709	TRIM6-TRIM34	B2RNG4	842 aa		28.58	■■■□□ 2.17
ERBB2-209	ENST00000578709	USP5	P45974	858 aa		28.58	■■■□□ 2.17
ERBB2-209	ENST00000578709	MAP3K10	Q02779	954 aa		28.58	■■■□□ 2.17
ERBB2-209	ENST00000578709	AIDA	Q96BJ3	306 aa		28.58	■■■□□ 2.17
ERBB2-209	ENST00000578709	VEGFB	P49765	207 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	ZMYM1	Q5SVZ6	1142 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	TTC22	Q5TAA0	569 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	MIGA2	Q7L4E1	593 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	CAPNS2	Q96L46	248 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	MYH1	P12882	1939 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	OTOF	Q9HC10	1997 aa		28.57	■■■□□ 2.16
ERBB2-209	ENST00000578709	ECE1	P42892	770 aa		28.56	■■■□□ 2.16
ERBB2-209	ENST00000578709	CYP4F22	Q6NT55	531 aa		28.56	■■■□□ 2.16
ERBB2-209	ENST00000578709	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	28.56	■■■□□ 2.16
ERBB2-209	ENST00000578709	ZNF341	Q9BYN7	854 aa		28.56	■■■□□ 2.16
ERBB2-209	ENST00000578709	DDX60L	Q5H9U9	1706 aa	Known RBP	28.55	■■■□□ 2.16
ERBB2-209	ENST00000578709	TBC1D12	O60347	775 aa		28.55	■■■□□ 2.16
ERBB2-209	ENST00000578709	ZNF157	P51786	506 aa	Predicted RBP	28.55	■■■□□ 2.16
ERBB2-209	ENST00000578709	RILPL2	Q969X0	211 aa		28.55	■■■□□ 2.16
ERBB2-209	ENST00000578709	STRBP	Q96SI9	672 aa	Known RBP	28.55	■■■□□ 2.16
ERBB2-209	ENST00000578709	ZNF112	Q9UJU3	913 aa		28.55	■■■□□ 2.16
ERBB2-209	ENST00000578709	WDR33	Q9C0J8	1336 aa	Known RBP	28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	GSPT1	P15170	499 aa	Known RBP	28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	ANKRD13A	Q8IZ07	590 aa		28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	CCDC102A	Q96A19	550 aa		28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	PI4KB	Q9UBF8	816 aa		28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	PALD1	Q9ULE6	856 aa		28.54	■■■□□ 2.16
ERBB2-209	ENST00000578709	NAV1	Q8NEY1	1877 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	SIPA1L1	O43166	1804 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	FAM155A	B1AL88	458 aa	Predicted RBP	28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709		M0R2C6	588 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	PRKAB2	O43741	272 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	MAP3K9	P80192	1104 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	SDR42E1	Q8WUS8	393 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	ATP8A2	Q9NTI2	1148 aa		28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	SAP30BP	Q9UHR5	308 aa	Known RBP	28.53	■■■□□ 2.16
ERBB2-209	ENST00000578709	GPAA1	O43292	621 aa		28.52	■■■□□ 2.16
ERBB2-209	ENST00000578709	SLC10A3	P09131	477 aa		28.52	■■■□□ 2.16
ERBB2-209	ENST00000578709	METTL16	Q86W50	562 aa	Known RBP	28.52	■■■□□ 2.16
ERBB2-209	ENST00000578709	RASAL3	Q86YV0	1011 aa		28.52	■■■□□ 2.16
ERBB2-209	ENST00000578709	CLMN	Q96JQ2	1002 aa		28.52	■■■□□ 2.16
ERBB2-209	ENST00000578709	WRNIP1	Q96S55	665 aa		28.52	■■■□□ 2.16
ERBB2-209	ENST00000578709	PHF20L1	A8MW92	1017 aa		28.51	■■■□□ 2.15
ERBB2-209	ENST00000578709	SEC62	Q99442	399 aa	Known RBP	28.51	■■■□□ 2.15
ERBB2-209	ENST00000578709	HERC5	Q9UII4	1024 aa	Known RBP	28.51	■■■□□ 2.15
ERBB2-209	ENST00000578709	SLC4A4	Q9Y6R1	1079 aa		28.51	■■■□□ 2.15
ERBB2-209	ENST00000578709	THSD7B	Q9C0I4	1608 aa		28.51	■■■□□ 2.15
ERBB2-209	ENST00000578709	HLA-DOA	P06340	250 aa		28.5	■■■□□ 2.15
ERBB2-209	ENST00000578709	VGLL4	Q14135	290 aa		28.5	■■■□□ 2.15
ERBB2-209	ENST00000578709	FOXP4	Q8IVH2	680 aa	Predicted RBP	28.5	■■■□□ 2.15
ERBB2-209	ENST00000578709	SLC10A4	Q96EP9	437 aa		28.5	■■■□□ 2.15
ERBB2-209	ENST00000578709	HELLS	Q9NRZ9	838 aa		28.5	■■■□□ 2.15
ERBB2-209	ENST00000578709	SLURP2	P0DP57	97 aa		28.49	■■■□□ 2.15
ERBB2-209	ENST00000578709	GNAT2	P19087	354 aa		28.49	■■■□□ 2.15
ERBB2-209	ENST00000578709	SDS	P20132	328 aa		28.49	■■■□□ 2.15
ERBB2-209	ENST00000578709	JMY	Q8N9B5	988 aa		28.49	■■■□□ 2.15
ERBB2-209	ENST00000578709	MCM9	Q9NXL9	1143 aa		28.49	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms