RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 BCRP11274 1271 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 GTF2F1P35269 517 aaKnown RBP eCLIP7.99□□□□□ -1.13
PTPRM-208ENST00000578600 GMPRP36959 345 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 LIG3P49916 1009 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 MAP3K11Q16584 847 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 AGMOQ6ZNB7 445 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 CHSY3Q70JA7 882 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 JPH1Q9HDC5 661 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-208ENST00000578600 PRDM6Q9NQX0 595 aa7.99□□□□□ -1.13
PTPRM-208ENST00000578600 GPN3Q9UHW5 284 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-208ENST00000578600 NPHP4O75161 1426 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 F6X3S4 739 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 M0R082 166 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 SOX1O00570 391 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 BMP6P22004 513 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 GBP2P32456 591 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 ZNF157P51786 506 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 RPS26P62854 115 aaKnown RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 LYPD4Q6UWN0 246 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 C8orf86Q6ZUL3 223 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 IL22RA1Q8N6P7 574 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 ZNF417Q8TAU3 575 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 DHX38Q92620 1227 aaKnown RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 ZNF587Q96SQ5 575 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-208ENST00000578600 GMLQ99445 158 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 TLR6Q9Y2C9 796 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 EID1Q9Y6B2 187 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 ABCC1P33527 1531 aa7.98□□□□□ -1.13
PTPRM-208ENST00000578600 RTEL1-TNFRSF6BF6WH68 1400 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 FAM135BQ49AJ0 1406 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 MINDY4BA8MYZ0 360 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 H3BRJ5 948 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 CELA2BP08218 269 aaPredicted RBP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 GARTP22102 1010 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 EIF4A3P38919 411 aaKnown RBP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 GJA8P48165 433 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 HNRNPMP52272 730 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 PPP2R3AQ06190 1150 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 PAK2Q13177 524 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 COL9A3Q14050 684 aaPredicted RBP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 IKBKEQ14164 716 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 RASIP1Q5U651 963 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 PCNX4Q63HM2 1172 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 ARMC5Q96C12 935 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 GPRASP2Q96D09 838 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 DNAJC2Q99543 621 aaKnown RBP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 MED14O60244 1454 aa7.97□□□□□ -1.13
PTPRM-208ENST00000578600 DHX29Q7Z478 1369 aaKnown RBP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRM-208ENST00000578600 ABCA6Q8N139 1617 aa7.96□□□□□ -1.13
PTPRM-208ENST00000578600 MIA2Q96PC5 1412 aa7.96□□□□□ -1.13
PTPRM-208ENST00000578600 LILRB5O75023 590 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-208ENST00000578600 TFE3P19532 575 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-208ENST00000578600 NME2P22392 152 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 CABP4P57796 275 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 LMNB2Q03252 620 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 HGSNATQ68CP4 663 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 ZNF772Q68DY9 489 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-208ENST00000578600 STK35Q8TDR2 534 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 SPON2Q9BUD6 331 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 SOX17Q9H6I2 414 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-208ENST00000578600 PPME1Q9Y570 386 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 CCNB3Q8WWL7 1395 aa7.96□□□□□ -1.14
PTPRM-208ENST00000578600 ZNF142P52746 1687 aaPredicted RBP7.95□□□□□ -1.14
PTPRM-208ENST00000578600 TM4SF5O14894 197 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 KIF3BO15066 747 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 GREM1O60565 184 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 PF4P02776 101 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 TSPY4P0CV99 314 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 TSPY10P0CW01 314 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 CAMK2GQ13555 558 aaPredicted RBP7.95□□□□□ -1.14
PTPRM-208ENST00000578600 FBXL19Q6PCT2 694 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 KIAA0825Q8IV33 1275 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 WHAMMQ8TF30 809 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 ZNF296Q8WUU4 475 aaPredicted RBP7.95□□□□□ -1.14
PTPRM-208ENST00000578600 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.95□□□□□ -1.143e-10■■■■□ 19.3
PTPRM-208ENST00000578600 CASKIN1Q8WXD9 1431 aa7.95□□□□□ -1.14
PTPRM-208ENST00000578600 FAM177BA6PVY3 158 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 WFS1O76024 890 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 ARNTP27540 789 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
PTPRM-208ENST00000578600 MSL1Q68DK7 614 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 DPH6Q7L8W6 267 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 PDZD3Q86UT5 571 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 RASGRP4Q8TDF6 673 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 WNT8BQ93098 351 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 EAF1Q96JC9 268 aaPredicted RBP7.94□□□□□ -1.14
PTPRM-208ENST00000578600 RGS17Q9UGC6 210 aaPredicted RBP7.94□□□□□ -1.14
PTPRM-208ENST00000578600 SAMM50Q9Y512 469 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 PZPP20742 1482 aa7.94□□□□□ -1.14
PTPRM-208ENST00000578600 KDM5DQ9BY66 1539 aa7.93□□□□□ -1.14
PTPRM-208ENST00000578600 SAMD9LQ8IVG5 1584 aa7.93□□□□□ -1.14
PTPRM-208ENST00000578600 MYO3AQ8NEV4 1616 aa7.93□□□□□ -1.14
PTPRM-208ENST00000578600 LINC01387J3KSC0 135 aa7.93□□□□□ -1.14
PTPRM-208ENST00000578600 STK10O94804 968 aaKnown RBP7.93□□□□□ -1.14
PTPRM-208ENST00000578600 NID1P14543 1247 aa7.93□□□□□ -1.14
PTPRM-208ENST00000578600 ZNF252P-AS1Q0IIN9 211 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms