RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 PTPN18Q99952 460 aa28.14■■■□□ 2.1
VAPA-205ENST00000578314 R3HDMLQ9H3Y0 253 aa28.14■■■□□ 2.1
VAPA-205ENST00000578314 RGS19P49795 217 aa28.13■■■□□ 2.09
VAPA-205ENST00000578314 SH3BP5LQ7L8J4 393 aa28.13■■■□□ 2.09
VAPA-205ENST00000578314 ERO1BQ86YB8 467 aa28.13■■■□□ 2.09
VAPA-205ENST00000578314 DDX4Q9NQI0 724 aaKnown RBP28.13■■■□□ 2.09
VAPA-205ENST00000578314 ZAP70P43403 619 aa28.12■■■□□ 2.09
VAPA-205ENST00000578314 GTF2A2P52657 109 aa28.12■■■□□ 2.09
VAPA-205ENST00000578314 OTUD5Q96G74 571 aa28.12■■■□□ 2.09
VAPA-205ENST00000578314 MYH2Q9UKX2 1941 aa28.12■■■□□ 2.09
VAPA-205ENST00000578314 ATRNL1Q5VV63 1379 aa28.11■■■□□ 2.09
VAPA-205ENST00000578314 OTOFQ9HC10 1997 aa28.11■■■□□ 2.09
VAPA-205ENST00000578314 INPP5BP32019 993 aa28.11■■■□□ 2.09
VAPA-205ENST00000578314 MAP3K10Q02779 954 aa28.11■■■□□ 2.09
VAPA-205ENST00000578314 AACSQ86V21 672 aa28.11■■■□□ 2.09
VAPA-205ENST00000578314 BRI3BPQ8WY22 251 aa28.1■■■□□ 2.09
VAPA-205ENST00000578314 DDTLA6NHG4 134 aaPredicted RBP28.09■■■□□ 2.09
VAPA-205ENST00000578314 PPATQ06203 517 aa28.09■■■□□ 2.09
VAPA-205ENST00000578314 PPIL2Q13356 520 aa28.09■■■□□ 2.09
VAPA-205ENST00000578314 PICALMQ13492 652 aa28.09■■■□□ 2.09
VAPA-205ENST00000578314 NAA16Q6N069 864 aaPredicted RBP28.09■■■□□ 2.09
VAPA-205ENST00000578314 KIF1BPQ96EK5 621 aa28.09■■■□□ 2.09
VAPA-205ENST00000578314 IL1RAPL2Q9NP60 686 aa28.09■■■□□ 2.09
VAPA-205ENST00000578314 PIH1D3Q9NQM4 214 aaKnown RBP28.09■■■□□ 2.09
VAPA-205ENST00000578314 RAB11FIP3O75154 756 aa28.08■■■□□ 2.09
VAPA-205ENST00000578314 NOL9Q5SY16 702 aaKnown RBP28.08■■■□□ 2.09
VAPA-205ENST00000578314 ZSCAN29Q8IWY8 852 aaPredicted RBP28.08■■■□□ 2.09
VAPA-205ENST00000578314 CCL15-CCL14A0A0B4J2E2 113 aa28.07■■■□□ 2.08
VAPA-205ENST00000578314 PHF20L1A8MW92 1017 aa28.07■■■□□ 2.08
VAPA-205ENST00000578314 IRF6O14896 467 aa28.07■■■□□ 2.08
VAPA-205ENST00000578314 FKTNO75072 461 aa28.07■■■□□ 2.08
VAPA-205ENST00000578314 PPP4CP60510 307 aa28.07■■■□□ 2.08
VAPA-205ENST00000578314 CCL15Q16663 113 aa28.07■■■□□ 2.08
VAPA-205ENST00000578314 CLASRPQ8N2M8 674 aaKnown RBP28.07■■■□□ 2.08
VAPA-205ENST00000578314 CETPP11597 493 aa28.06■■■□□ 2.08
VAPA-205ENST00000578314 MLLT1Q03111 559 aaPredicted RBP28.06■■■□□ 2.08
VAPA-205ENST00000578314 PKN2Q16513 984 aaKnown RBP28.06■■■□□ 2.08
VAPA-205ENST00000578314 BAG3O95817 575 aa28.05■■■□□ 2.08
VAPA-205ENST00000578314 CRHR2Q13324 411 aa28.05■■■□□ 2.08
VAPA-205ENST00000578314 SNAPC2Q13487 334 aa28.05■■■□□ 2.08
VAPA-205ENST00000578314 NOL10Q9BSC4 688 aaKnown RBP28.05■■■□□ 2.08
VAPA-205ENST00000578314 APBB1O00213 710 aa28.04■■■□□ 2.08
VAPA-205ENST00000578314 ADGRA1Q86SQ6 560 aa28.04■■■□□ 2.08
VAPA-205ENST00000578314 TEX11Q8IYF3 940 aa28.04■■■□□ 2.08
VAPA-205ENST00000578314 SH3RF3Q8TEJ3 882 aaPredicted RBP28.04■■■□□ 2.08
VAPA-205ENST00000578314 TBC1D12O60347 775 aa28.03■■■□□ 2.08
VAPA-205ENST00000578314 PLCG2P16885 1265 aa28.03■■■□□ 2.08
VAPA-205ENST00000578314 OSBPL5Q9H0X9 879 aaPredicted RBP28.03■■■□□ 2.08
VAPA-205ENST00000578314 AATFQ9NY61 560 aaKnown RBP eCLIP28.03■■■□□ 2.08
VAPA-205ENST00000578314 KCNH4Q9UQ05 1017 aa28.03■■■□□ 2.08
VAPA-205ENST00000578314 TMED8Q6PL24 325 aaPredicted RBP28.02■■■□□ 2.08
VAPA-205ENST00000578314 FAM43AQ8N2R8 423 aa28.02■■■□□ 2.08
VAPA-205ENST00000578314 NDUFB9Q9Y6M9 179 aa28.02■■■□□ 2.08
VAPA-205ENST00000578314 COL2A1P02458 1487 aaPredicted RBP28.02■■■□□ 2.08
VAPA-205ENST00000578314 IFIT2P09913 472 aaKnown RBP28.01■■■□□ 2.07
VAPA-205ENST00000578314 SCYL3Q8IZE3 742 aa28.01■■■□□ 2.07
VAPA-205ENST00000578314 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.01■■■□□ 2.07
VAPA-205ENST00000578314 ANTXR1Q9H6X2 564 aa28.01■■■□□ 2.07
VAPA-205ENST00000578314 ZCCHC17Q9NP64 241 aaKnown RBP28.01■■■□□ 2.07
VAPA-205ENST00000578314 HPS5Q9UPZ3 1129 aa28.01■■■□□ 2.07
VAPA-205ENST00000578314 IDH1O75874 414 aaKnown RBP28■■■□□ 2.07
VAPA-205ENST00000578314 SLURP2P0DP57 97 aa28■■■□□ 2.07
VAPA-205ENST00000578314 BTBD19C9JJ37 291 aa27.99■■■□□ 2.07
VAPA-205ENST00000578314 CTNND1O60716 968 aaKnown RBP27.99■■■□□ 2.07
VAPA-205ENST00000578314 CYP7A1P22680 504 aa27.99■■■□□ 2.07
VAPA-205ENST00000578314 ZFYVE28Q9HCC9 887 aa27.99■■■□□ 2.07
VAPA-205ENST00000578314 CXCL11O14625 94 aa27.98■■■□□ 2.07
VAPA-205ENST00000578314 MAP3K12Q12852 859 aa27.98■■■□□ 2.07
VAPA-205ENST00000578314 TAF1CQ15572 869 aaPredicted RBP27.98■■■□□ 2.07
VAPA-205ENST00000578314 AK9Q5TCS8 1911 aa27.97■■■□□ 2.07
VAPA-205ENST00000578314 PTPRAP18433 802 aa27.97■■■□□ 2.07
VAPA-205ENST00000578314 SOX10P56693 466 aa27.97■■■□□ 2.07
VAPA-205ENST00000578314 TTF1Q15361 905 aaPredicted RBP27.97■■■□□ 2.07
VAPA-205ENST00000578314 DHX36Q9H2U1 1008 aaKnown RBP27.97■■■□□ 2.07
VAPA-205ENST00000578314 PICK1Q9NRD5 415 aa27.97■■■□□ 2.07
VAPA-205ENST00000578314 FBXO46Q6PJ61 603 aaPredicted RBP27.96■■■□□ 2.07
VAPA-205ENST00000578314 CERS3Q8IU89 383 aa27.96■■■□□ 2.07
VAPA-205ENST00000578314 MAGEB6Q8N7X4 407 aa27.96■■■□□ 2.07
VAPA-205ENST00000578314 TGFBRAP1Q8WUH2 860 aa27.96■■■□□ 2.07
VAPA-205ENST00000578314 ERO1AQ96HE7 468 aa27.96■■■□□ 2.07
VAPA-205ENST00000578314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.96■■■□□ 2.07
VAPA-205ENST00000578314 PI4KBQ9UBF8 816 aa27.96■■■□□ 2.07
VAPA-205ENST00000578314 ZHX2Q9Y6X8 837 aa27.96■■■□□ 2.07
VAPA-205ENST00000578314 SP3Q02447 781 aa27.95■■■□□ 2.06
VAPA-205ENST00000578314 MOGSQ13724 837 aa27.95■■■□□ 2.06
VAPA-205ENST00000578314 ANKRD23Q86SG2 305 aa27.95■■■□□ 2.06
VAPA-205ENST00000578314 LRRCC1Q9C099 1032 aa27.95■■■□□ 2.06
VAPA-205ENST00000578314 HERC5Q9UII4 1024 aaKnown RBP27.95■■■□□ 2.06
VAPA-205ENST00000578314 FLT1P17948 1338 aa27.94■■■□□ 2.06
VAPA-205ENST00000578314 TNRC18O15417 2968 aaPredicted RBP27.94■■■□□ 2.06
VAPA-205ENST00000578314 DYNLL1P63167 89 aaKnown RBP27.94■■■□□ 2.06
VAPA-205ENST00000578314 MAPKAPK5Q8IW41 473 aa27.94■■■□□ 2.06
VAPA-205ENST00000578314 AFG3L2Q9Y4W6 797 aa27.94■■■□□ 2.06
VAPA-205ENST00000578314 MAST2Q6P0Q8 1798 aa27.94■■■□□ 2.06
VAPA-205ENST00000578314 DOCK2Q92608 1830 aa27.93■■■□□ 2.06
VAPA-205ENST00000578314 FAM196BA6NMK8 535 aa27.93■■■□□ 2.06
VAPA-205ENST00000578314 TLR2O60603 784 aa27.93■■■□□ 2.06
VAPA-205ENST00000578314 RRP1P56182 461 aaKnown RBP27.93■■■□□ 2.06
VAPA-205ENST00000578314 DCTPP1Q9H773 170 aa27.93■■■□□ 2.06
VAPA-205ENST00000578314 ATP5JP18859 108 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms