RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 ISM2Q6H9L7 571 aa20.37■□□□□ 0.85
ERBB2-205ENST00000578199 CPLX2Q6PUV4 134 aaKnown RBP20.37■□□□□ 0.85
ERBB2-205ENST00000578199 MROH7-TTC4A0A0A0MT08 1334 aa20.37■□□□□ 0.85
ERBB2-205ENST00000578199 ZNF202O95125 648 aa20.37■□□□□ 0.85
ERBB2-205ENST00000578199 AOPEPQ8N6M6 819 aa20.37■□□□□ 0.85
ERBB2-205ENST00000578199 ANO10Q9NW15 660 aa20.37■□□□□ 0.85
ERBB2-205ENST00000578199 TPM3P06753 285 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 PFKFB1P16118 471 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 LIFRP42702 1097 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 HSP90AA2PQ14568 343 aaPredicted RBP20.36■□□□□ 0.85
ERBB2-205ENST00000578199 ANKRD18AQ8IVF6 992 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 CDC5LQ99459 802 aaKnown RBP20.36■□□□□ 0.85
ERBB2-205ENST00000578199 NACAP1Q9BZK3 213 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 ZNF652Q9Y2D9 606 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 CHD4Q14839 1912 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 CAVIN2O95810 425 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 ARID5BQ14865 1188 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 SLC39A14Q15043 492 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 DPCR1Q3MIW9 517 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
ERBB2-205ENST00000578199 KRT23Q9C075 422 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 KIAA1468Q9P260 1216 aa20.36■□□□□ 0.85
ERBB2-205ENST00000578199 TSC1Q92574 1164 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 CLIC6Q96NY7 704 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 CNNM2Q9H8M5 875 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
ERBB2-205ENST00000578199 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
ERBB2-205ENST00000578199 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 STAG1Q8WVM7 1258 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 KCNJ14Q9UNX9 436 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 PNPLA7Q6ZV29 1317 aa20.35■□□□□ 0.85
ERBB2-205ENST00000578199 CYP2D7A0A087X1C5 515 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 KLRK1P26718 216 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 DYNLL1P63167 89 aaKnown RBP20.34■□□□□ 0.85
ERBB2-205ENST00000578199 WTAPQ15007 396 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 BCL9LQ86UU0 1499 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 NUP133Q8WUM0 1156 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 CACTINQ8WUQ7 758 aaKnown RBP20.34■□□□□ 0.85
ERBB2-205ENST00000578199 MINPP1Q9UNW1 487 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 GNAT2P19087 354 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 PPARAQ07869 468 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 TRIM29Q14134 588 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 BARGINQ6ZT62 677 aa20.34■□□□□ 0.85
ERBB2-205ENST00000578199 SMARCC1Q92922 1105 aaPredicted RBP20.34■□□□□ 0.85
ERBB2-205ENST00000578199 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.34■□□□□ 0.85
ERBB2-205ENST00000578199 COL1A1P02452 1464 aaPredicted RBP20.34■□□□□ 0.85
ERBB2-205ENST00000578199 FAM182BQ5T319 152 aa20.33■□□□□ 0.85
ERBB2-205ENST00000578199 CEP57L1Q8IYX8 460 aa20.33■□□□□ 0.85
ERBB2-205ENST00000578199 MAP3K14Q99558 947 aa20.33■□□□□ 0.85
ERBB2-205ENST00000578199 RREB1Q92766 1687 aa20.33■□□□□ 0.85
ERBB2-205ENST00000578199 MAGEB6P1A0A0J9YX57 407 aa20.33■□□□□ 0.84
ERBB2-205ENST00000578199 BTBD18B2RXH4 712 aa20.33■□□□□ 0.84
ERBB2-205ENST00000578199 CMA1P23946 247 aa20.33■□□□□ 0.84
ERBB2-205ENST00000578199 PTPAQ15257 358 aa20.33■□□□□ 0.84
ERBB2-205ENST00000578199 SHC4Q6S5L8 630 aa20.33■□□□□ 0.84
ERBB2-205ENST00000578199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.33■□□□□ 0.84
ERBB2-205ENST00000578199 SRP68Q9UHB9 627 aaKnown RBP20.33■□□□□ 0.84
ERBB2-205ENST00000578199 SLC3A2P08195 630 aaKnown RBP20.32■□□□□ 0.84
ERBB2-205ENST00000578199 FMNL1O95466 1100 aaPredicted RBP20.32■□□□□ 0.84
ERBB2-205ENST00000578199 U2AF2P26368 475 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■□□□□ 10.6
ERBB2-205ENST00000578199 SPECC1Q5M775 1068 aa20.32■□□□□ 0.84
ERBB2-205ENST00000578199 CLEC4GQ6UXB4 293 aa20.32■□□□□ 0.84
ERBB2-205ENST00000578199 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
ERBB2-205ENST00000578199 FAM84BQ96KN1 310 aaPredicted RBP20.32■□□□□ 0.84
ERBB2-205ENST00000578199 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
ERBB2-205ENST00000578199 BCORQ6W2J9 1755 aa20.32■□□□□ 0.84
ERBB2-205ENST00000578199 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
ERBB2-205ENST00000578199 EVX2Q03828 476 aa20.31■□□□□ 0.84
ERBB2-205ENST00000578199 RTN1Q16799 776 aa20.31■□□□□ 0.84
ERBB2-205ENST00000578199 SARM1Q6SZW1 724 aa20.31■□□□□ 0.84
ERBB2-205ENST00000578199 BSDC1Q9NW68 430 aaPredicted RBP20.31■□□□□ 0.84
ERBB2-205ENST00000578199 ERICH2A1L162 156 aa20.31■□□□□ 0.84
ERBB2-205ENST00000578199 PRDM1O75626 825 aa20.31■□□□□ 0.84
ERBB2-205ENST00000578199 IFNAR1P17181 557 aa20.31■□□□□ 0.84
ERBB2-205ENST00000578199 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
ERBB2-205ENST00000578199 SART3Q15020 963 aaKnown RBP20.3■□□□□ 0.84
ERBB2-205ENST00000578199 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
ERBB2-205ENST00000578199 FILIP1Q7Z7B0 1213 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 RIOK1Q9BRS2 568 aaKnown RBP20.3■□□□□ 0.84
ERBB2-205ENST00000578199 SYKP43405 635 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 CAVIN4Q5BKX8 364 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 GNL3LQ9NVN8 582 aaKnown RBP20.3■□□□□ 0.84
ERBB2-205ENST00000578199 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 JAG2Q9Y219 1238 aa20.3■□□□□ 0.84
ERBB2-205ENST00000578199 MYRIPQ8NFW9 859 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 NAT10Q9H0A0 1025 aaKnown RBP20.29■□□□□ 0.84
ERBB2-205ENST00000578199 LAMB2P55268 1798 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 CICQ96RK0 1608 aaPredicted RBP20.29■□□□□ 0.84
ERBB2-205ENST00000578199 hCG_1642624A0A1W2PR95 340 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 RRP9O43818 475 aaKnown RBP20.29■□□□□ 0.84
ERBB2-205ENST00000578199 NR5A1Q13285 461 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 UBE4AQ14139 1066 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 DIS3L2Q8IYB7 885 aaKnown RBP20.29■□□□□ 0.84
ERBB2-205ENST00000578199 ZNF654Q8IZM8 581 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms