RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 C7orf61Q8IZ16 206 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-217ENST00000577897 ZMYND8Q9ULU4 1186 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-217ENST00000577897 GABRQQ9UN88 632 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 TTC28Q96AY4 2481 aa17.11■□□□□ 0.33
SREBF1-217ENST00000577897 CSF1RP07333 972 aa17.1■□□□□ 0.33
SREBF1-217ENST00000577897 ANKRD23Q86SG2 305 aa17.1■□□□□ 0.33
SREBF1-217ENST00000577897 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
SREBF1-217ENST00000577897 LINS1Q8NG48 757 aa17.1■□□□□ 0.33
SREBF1-217ENST00000577897 DEFB118Q96PH6 123 aa17.1■□□□□ 0.33
SREBF1-217ENST00000577897 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
SREBF1-217ENST00000577897 ADCY3O60266 1144 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 INHAP05111 366 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 ELNP15502 786 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 BMP8BP34820 402 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 GCKRQ14397 625 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 SKAP1Q86WV1 359 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 PAWRQ96IZ0 340 aaKnown RBP17.09■□□□□ 0.33
SREBF1-217ENST00000577897 IPO9Q96P70 1041 aaKnown RBP17.09■□□□□ 0.33
SREBF1-217ENST00000577897 GDF15Q99988 308 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-217ENST00000577897 FAM205AQ6ZU69 1335 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 ALPK3Q96L96 1907 aa17.09■□□□□ 0.33
SREBF1-217ENST00000577897 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
SREBF1-217ENST00000577897 BCAMP50895 628 aa17.08■□□□□ 0.32
SREBF1-217ENST00000577897 PPATQ06203 517 aa17.08■□□□□ 0.32
SREBF1-217ENST00000577897 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
SREBF1-217ENST00000577897 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
SREBF1-217ENST00000577897 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
SREBF1-217ENST00000577897 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
SREBF1-217ENST00000577897 SYN1P17600 705 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 INPP5BP32019 993 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 GYG1P46976 350 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 CASP7P55210 303 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 LRIT3Q3SXY7 679 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
SREBF1-217ENST00000577897 PARK7Q99497 189 aaKnown RBP17.07■□□□□ 0.32
SREBF1-217ENST00000577897 MGAMO43451 1857 aa17.07■□□□□ 0.32
SREBF1-217ENST00000577897 CYP2C8P10632 490 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 FLT3LGP49771 235 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 NECAB2Q7Z6G3 386 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
SREBF1-217ENST00000577897 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
SREBF1-217ENST00000577897 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
SREBF1-217ENST00000577897 BCRP11274 1271 aa17.05■□□□□ 0.32
SREBF1-217ENST00000577897 GRIK5Q16478 980 aa17.05■□□□□ 0.32
SREBF1-217ENST00000577897 TDHQ8IZJ6 230 aa17.05■□□□□ 0.32
SREBF1-217ENST00000577897 ZNF594Q96JF6 807 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-217ENST00000577897 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
SREBF1-217ENST00000577897 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
SREBF1-217ENST00000577897 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
SREBF1-217ENST00000577897 HIBADHP31937 336 aaKnown RBP17.04■□□□□ 0.32
SREBF1-217ENST00000577897 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-217ENST00000577897 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
SREBF1-217ENST00000577897 IQSEC3Q9UPP2 1182 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-217ENST00000577897 TNPO2O14787 897 aaKnown RBP17.03■□□□□ 0.32
SREBF1-217ENST00000577897 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-217ENST00000577897 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
SREBF1-217ENST00000577897 TEKT1Q969V4 418 aa17.03■□□□□ 0.32
SREBF1-217ENST00000577897 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-217ENST00000577897 KCNH4Q9UQ05 1017 aa17.03■□□□□ 0.32
SREBF1-217ENST00000577897 GRM8O00222 908 aa17.02■□□□□ 0.32
SREBF1-217ENST00000577897 CAPN2P17655 700 aa17.02■□□□□ 0.32
SREBF1-217ENST00000577897 MOGSQ13724 837 aa17.02■□□□□ 0.32
SREBF1-217ENST00000577897 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
SREBF1-217ENST00000577897 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
SREBF1-217ENST00000577897 SSH3Q8TE77 659 aa17.02■□□□□ 0.32
SREBF1-217ENST00000577897 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.32
SREBF1-217ENST00000577897 RPTORQ8N122 1335 aa17.01■□□□□ 0.31
SREBF1-217ENST00000577897 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-217ENST00000577897 FOXO4P98177 505 aa17.01■□□□□ 0.31
SREBF1-217ENST00000577897 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
SREBF1-217ENST00000577897 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
SREBF1-217ENST00000577897 FAM84BQ96KN1 310 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-217ENST00000577897 CRISPLD2Q9H0B8 497 aa17.01■□□□□ 0.31
SREBF1-217ENST00000577897 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.01■□□□□ 0.311e-9■■■■□ 21.1
SREBF1-217ENST00000577897 UTYO14607 1347 aa17■□□□□ 0.31
SREBF1-217ENST00000577897 SRGAP3O43295 1099 aa17■□□□□ 0.31
SREBF1-217ENST00000577897 MTX1Q13505 466 aa17■□□□□ 0.31
SREBF1-217ENST00000577897 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
SREBF1-217ENST00000577897 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
SREBF1-217ENST00000577897 VPS37DQ86XT2 251 aa17■□□□□ 0.31
SREBF1-217ENST00000577897 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
SREBF1-217ENST00000577897 COL9A1P20849 921 aa16.99■□□□□ 0.31
SREBF1-217ENST00000577897 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
SREBF1-217ENST00000577897 IRF5Q13568 498 aa16.99■□□□□ 0.31
SREBF1-217ENST00000577897 UBE4AQ14139 1066 aa16.99■□□□□ 0.31
SREBF1-217ENST00000577897 POLA2Q14181 598 aa16.99■□□□□ 0.31
SREBF1-217ENST00000577897 BECN1Q14457 450 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms