RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 CNTNAP1P78357 1384 aa8.72□□□□□ -1.01
CASC3-205ENST00000577605 ZBTB7BO15156 539 aaPredicted RBP8.71□□□□□ -1.02
CASC3-205ENST00000577605 RNF40O75150 1001 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 KLRK1P26718 216 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 NF2P35240 595 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 GYG1P46976 350 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 ATP8B2P98198 1209 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 G3BP1Q13283 466 aaKnown RBP eCLIP8.71□□□□□ -1.02
CASC3-205ENST00000577605 ATP2B3Q16720 1220 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 USP48Q86UV5 1035 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 APOBEC3FQ8IUX4 373 aaKnown RBP8.71□□□□□ -1.02
CASC3-205ENST00000577605 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 WDR66Q8TBY9 1149 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 GLIS2Q9BZE0 524 aaPredicted RBP8.71□□□□□ -1.02
CASC3-205ENST00000577605 DDX19BQ9UMR2 479 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 MTMR7Q9Y216 660 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 MYH3P11055 1940 aa8.71□□□□□ -1.02
CASC3-205ENST00000577605 UNCXA6NJT0 531 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 SNAP23O00161 211 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 WNT10BO00744 389 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 CELF2O95319 508 aaKnown RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 MAP2K2P36507 400 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 MAP2K1Q02750 393 aaPredicted RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 TNFAIP1Q13829 316 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 PDE3AQ14432 1141 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 HIC1Q14526 733 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 MVPQ14764 893 aaKnown RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 HSP90AB4PQ58FF6 505 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 MFSD14BQ5SR56 506 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 ANGEL2Q5VTE6 544 aaKnown RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 CST9Q5W186 159 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 KIAA0825Q8IV33 1275 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 ZGPATQ8N5A5 531 aaKnown RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 KLHDC4Q8TBB5 520 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 ZBED3Q96IU2 234 aaPredicted RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 GPR108Q9NPR9 543 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 GGA3Q9NZ52 723 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 DENND2AQ9ULE3 1009 aa8.7□□□□□ -1.02
CASC3-205ENST00000577605 PDS5AQ29RF7 1337 aaKnown RBP8.7□□□□□ -1.02
CASC3-205ENST00000577605 TAF1P21675 1872 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 SHTN1A0MZ66 631 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 EGFRP00533 1210 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 PPP4CP60510 307 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 SAPCD2Q86UD0 394 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 RPAP2Q8IXW5 612 aaPredicted RBP8.69□□□□□ -1.02
CASC3-205ENST00000577605 CERS5Q8N5B7 392 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 SSH3Q8TE77 659 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 SIL1Q9H173 461 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
CASC3-205ENST00000577605 SALL1Q9NSC2 1324 aa8.69□□□□□ -1.02
CASC3-205ENST00000577605 COL1A1P02452 1464 aaPredicted RBP8.69□□□□□ -1.02
CASC3-205ENST00000577605 TRAF5O00463 557 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 HMMRO75330 724 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 TNNI2P48788 182 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 HTRA3P83110 453 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 SUPT20HL1Q3ZLR7 823 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 CFAP100Q494V2 611 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 SPTY2D1Q68D10 685 aaPredicted RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 HHIPL2Q6UWX4 724 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 ERC1Q8IUD2 1116 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 TEKT1Q969V4 418 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 HOOK2Q96ED9 719 aa8.68□□□□□ -1.02
CASC3-205ENST00000577605 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 TTF2Q9UNY4 1162 aaKnown RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 WDR33Q9C0J8 1336 aaKnown RBP8.68□□□□□ -1.02
CASC3-205ENST00000577605 CA12O43570 354 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 UQCRFS1P1P0C7P4 283 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 FECHP22830 423 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 VEGFBP49765 207 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 RBM5P52756 815 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■■■■□ 23
CASC3-205ENST00000577605 NOGQ13253 232 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 GORABQ5T7V8 394 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 FKBP1CQ5VVH2 108 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 TMED8Q6PL24 325 aaPredicted RBP8.67□□□□□ -1.02
CASC3-205ENST00000577605 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 CDCA5Q96FF9 252 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 CAPNS2Q96L46 248 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 ZNF408Q9H9D4 720 aa8.67□□□□□ -1.02
CASC3-205ENST00000577605 PA2G4Q9UQ80 394 aaKnown RBP8.67□□□□□ -1.02
CASC3-205ENST00000577605 PNMA6EA0A0J9YXQ4 647 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 A0A1B0GUL7 405 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 ADM5C9JUS6 153 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
CASC3-205ENST00000577605 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
CASC3-205ENST00000577605 MAP4K4O95819 1239 aaPredicted RBP8.66□□□□□ -1.02
CASC3-205ENST00000577605 RLBP1P12271 317 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 CRKP46108 304 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 HUNKP57058 714 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 TFCP2Q12800 502 aa8.66□□□□□ -1.02
CASC3-205ENST00000577605 CHAF1AQ13111 956 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms