RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 KCNA1Q09470 495 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 ZNF252P-AS1Q0IIN9 211 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 CDK5R2Q13319 367 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 TTLL4Q14679 1199 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 CYP27C1Q4G0S4 372 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 TP53INP2Q8IXH6 220 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 ASB16Q96NS5 453 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 EMILIN2Q9BXX0 1053 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 SRCIN1Q9C0H9 1055 aa5.14□□□□□ -1.59
CDH8-204ENST00000577536 RNGTTO60942 597 aaKnown RBP5.13□□□□□ -1.59
CDH8-204ENST00000577536 NEFMP07197 916 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 FAM87AP0C7U9 286 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
CDH8-204ENST00000577536 ZC3H12AQ5D1E8 599 aaKnown RBP5.13□□□□□ -1.59
CDH8-204ENST00000577536 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 MAP1SQ66K74 1059 aaPredicted RBP5.13□□□□□ -1.59
CDH8-204ENST00000577536 ALG1LQ6GMV1 187 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 FLCNQ8NFG4 579 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 NECAB3Q96P71 396 aaPredicted RBP5.13□□□□□ -1.59
CDH8-204ENST00000577536 SETDB2Q96T68 719 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 OSBPL7Q9BZF2 842 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 PCOLCE2Q9UKZ9 415 aa5.13□□□□□ -1.59
CDH8-204ENST00000577536 ENC1O14682 589 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 GIPC1O14908 333 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 ERVK-24P63145 666 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 TPTE2Q6XPS3 522 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 CBLL1Q75N03 491 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 GPBAR1Q8TDU6 330 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 CBX8Q9HC52 389 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 PAK6Q9NQU5 681 aaPredicted RBP5.12□□□□□ -1.59
CDH8-204ENST00000577536 CACNA2D2Q9NY47 1150 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 PPM1HQ9ULR3 514 aa5.12□□□□□ -1.59
CDH8-204ENST00000577536 BMP6P22004 513 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 ATP2B2Q01814 1243 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 COL19A1Q14993 1142 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 RNF214Q8ND24 703 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 AGBL5Q8NDL9 886 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 ANKRD24Q8TF21 1146 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 BCL7CQ8WUZ0 217 aaPredicted RBP5.11□□□□□ -1.59
CDH8-204ENST00000577536 ISL2Q96A47 359 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 ACSBG1Q96GR2 724 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 CEP44Q9C0F1 390 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 WWC3Q9ULE0 1092 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 SLC5A6Q9Y289 635 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 SAMM50Q9Y512 469 aa5.11□□□□□ -1.59
CDH8-204ENST00000577536 FBXO24O75426 580 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 PAGE1O75459 146 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 LEFTY1O75610 366 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 TRIM37O94972 964 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 MPRIPQ6WCQ1 1025 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.1□□□□□ -1.59
CDH8-204ENST00000577536 STK11IPQ8N1F8 1099 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 PLD6Q8N2A8 252 aaKnown RBP5.1□□□□□ -1.59
CDH8-204ENST00000577536 FAM181AQ8N9Y4 354 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 GRIN3AQ8TCU5 1115 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 MISP3Q96FF7 219 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 DUSP23Q9BVJ7 150 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 SSU72Q9NP77 194 aaKnown RBP5.1□□□□□ -1.59
CDH8-204ENST00000577536 SPG7Q9UQ90 795 aa5.1□□□□□ -1.59
CDH8-204ENST00000577536 P4HBP07237 508 aaKnown RBP5.09□□□□□ -1.59
CDH8-204ENST00000577536 LLGL2Q6P1M3 1020 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 SPRED2Q7Z698 418 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 WFDC3Q8IUB2 231 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 NETO1Q8TDF5 533 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 C12orf49Q9H741 205 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 U3KQE9 123 aa5.09□□□□□ -1.59
CDH8-204ENST00000577536 CELA3AP09093 270 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 NTF4P34130 210 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 LRRC14Q15048 493 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 PPM1JQ5JR12 505 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 RASIP1Q5U651 963 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 SCARA3Q6AZY7 606 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 ZNF574Q6ZN55 896 aaPredicted RBP5.08□□□□□ -1.6
CDH8-204ENST00000577536 TOP6BLQ8N6T0 577 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 TRAIPQ9BWF2 469 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 MKNK2Q9HBH9 465 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 FAM8A1Q9UBU6 413 aa5.08□□□□□ -1.6
CDH8-204ENST00000577536 DCDC2CA8MYV0 355 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 PATL2C9JE40 543 aaKnown RBP5.07□□□□□ -1.6
CDH8-204ENST00000577536 LDHBP07195 334 aaKnown RBP5.07□□□□□ -1.6
CDH8-204ENST00000577536 USP17L7P0C7H9 530 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 ITGB5P18084 799 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 OXCT1P55809 520 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 PRKCQQ04759 706 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 RING1Q06587 406 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 BNIP3Q12983 259 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 PLCL1Q15111 1095 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 IFI16Q16666 785 aaKnown RBP5.07□□□□□ -1.6
CDH8-204ENST00000577536 PCNX4Q63HM2 1172 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 ARHGAP27Q6ZUM4 889 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 C12orf40Q86WS4 652 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 PICK1Q9NRD5 415 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 VAV3Q9UKW4 847 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 PCDHA4Q9UN74 947 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 CSADQ9Y600 493 aa5.07□□□□□ -1.6
CDH8-204ENST00000577536 FANCGO15287 622 aa5.06□□□□□ -1.6
CDH8-204ENST00000577536 CEACAM5P06731 702 aa5.06□□□□□ -1.6
CDH8-204ENST00000577536 JUNBP17275 347 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms