RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 ZSCAN29Q8IWY8 852 aaPredicted RBP19.03■□□□□ 0.64
NCBP3-207ENST00000577169 TGFBRAP1Q8WUH2 860 aa19.03■□□□□ 0.64
NCBP3-207ENST00000577169 LNPKQ9C0E8 428 aa19.03■□□□□ 0.64
NCBP3-207ENST00000577169 RFX7Q2KHR2 1363 aa19.03■□□□□ 0.64
NCBP3-207ENST00000577169 RPAP1Q9BWH6 1393 aaPredicted RBP19.03■□□□□ 0.64
NCBP3-207ENST00000577169 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 ZNF532Q9HCE3 1301 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 UNCXA6NJT0 531 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 ERC2O15083 957 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 MX1P20591 662 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 MAP3K9P80192 1104 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 KIF23Q02241 960 aaPredicted RBP19.02■□□□□ 0.64
NCBP3-207ENST00000577169 SLFNL1Q499Z3 407 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 DCAF15Q66K64 600 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 ANKRD13AQ8IZ07 590 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 PI4K2BQ8TCG2 481 aa19.02■□□□□ 0.64
NCBP3-207ENST00000577169 TCRBV5S4A2TA0A5A2 114 aa19.01■□□□□ 0.63
NCBP3-207ENST00000577169 HSPA1AP0DMV8 641 aaKnown RBP19.01■□□□□ 0.63
NCBP3-207ENST00000577169 HSPA1BP0DMV9 641 aaKnown RBP19.01■□□□□ 0.63
NCBP3-207ENST00000577169 ADD2P35612 726 aa19.01■□□□□ 0.63
NCBP3-207ENST00000577169 NUCB1Q02818 461 aa19.01■□□□□ 0.63
NCBP3-207ENST00000577169 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
NCBP3-207ENST00000577169 CHD1LQ86WJ1 897 aa19.01■□□□□ 0.63
NCBP3-207ENST00000577169 ZNF341Q9BYN7 854 aa19.01■□□□□ 0.63
NCBP3-207ENST00000577169 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.01■□□□□ 0.633e-6■■□□□ 12.7
NCBP3-207ENST00000577169 WBP1LQ9NX94 342 aa19.01■□□□□ 0.63
NCBP3-207ENST00000577169 MAGEB6P1A0A0J9YX57 407 aa19■□□□□ 0.63
NCBP3-207ENST00000577169 GLRX3O76003 335 aaKnown RBP19■□□□□ 0.63
NCBP3-207ENST00000577169 CHGBP05060 677 aa19■□□□□ 0.63
NCBP3-207ENST00000577169 MAP2K1Q02750 393 aaPredicted RBP19■□□□□ 0.63
NCBP3-207ENST00000577169 MKRN3Q13064 507 aaKnown RBP19■□□□□ 0.63
NCBP3-207ENST00000577169 MAPKAPK5Q8IW41 473 aa19■□□□□ 0.63
NCBP3-207ENST00000577169 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19■□□□□ 0.63
NCBP3-207ENST00000577169 CSRNP1Q96S65 589 aa19■□□□□ 0.63
NCBP3-207ENST00000577169 OSBPL5Q9H0X9 879 aaPredicted RBP19■□□□□ 0.63
NCBP3-207ENST00000577169 STAP2Q9UGK3 403 aa19■□□□□ 0.63
NCBP3-207ENST00000577169 SLURP2P0DP57 97 aa18.99■□□□□ 0.63
NCBP3-207ENST00000577169 PDE1AP54750 535 aa18.99■□□□□ 0.63
NCBP3-207ENST00000577169 KBTBD3Q8NAB2 608 aa18.99■□□□□ 0.63
NCBP3-207ENST00000577169 WRNIP1Q96S55 665 aa18.99■□□□□ 0.63
NCBP3-207ENST00000577169 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
NCBP3-207ENST00000577169 ELP3Q9H9T3 547 aa18.99■□□□□ 0.63
NCBP3-207ENST00000577169 ZNF112Q9UJU3 913 aa18.99■□□□□ 0.63
NCBP3-207ENST00000577169 MAP3K10Q02779 954 aa18.98■□□□□ 0.63
NCBP3-207ENST00000577169 SPRYD7Q5W111 196 aa18.98■□□□□ 0.63
NCBP3-207ENST00000577169 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
NCBP3-207ENST00000577169 CERS3Q8IU89 383 aa18.98■□□□□ 0.63
NCBP3-207ENST00000577169 ZKSCAN4Q969J2 545 aaPredicted RBP18.98■□□□□ 0.63
NCBP3-207ENST00000577169 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
NCBP3-207ENST00000577169 INPP5BP32019 993 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 USP5P45974 858 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 VGLL4Q14135 290 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 UBE3CQ15386 1083 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 CSADQ9Y600 493 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 FLT1P17948 1338 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 CDK5RAP2Q96SN8 1893 aa18.97■□□□□ 0.63
NCBP3-207ENST00000577169 ATRNL1Q5VV63 1379 aa18.96■□□□□ 0.63
NCBP3-207ENST00000577169 GJA5P36382 358 aa18.96■□□□□ 0.63
NCBP3-207ENST00000577169 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
NCBP3-207ENST00000577169 ARMT1Q9H993 441 aa18.96■□□□□ 0.63
NCBP3-207ENST00000577169 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
NCBP3-207ENST00000577169 PALD1Q9ULE6 856 aa18.96■□□□□ 0.63
NCBP3-207ENST00000577169 THSD7BQ9C0I4 1608 aa18.96■□□□□ 0.63
NCBP3-207ENST00000577169 CEP350Q5VT06 3117 aa18.96■□□□□ 0.63
NCBP3-207ENST00000577169 PHF20L1A8MW92 1017 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 FOXN1O15353 648 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 RNF113AO15541 343 aaKnown RBP18.95■□□□□ 0.62
NCBP3-207ENST00000577169 TBC1D12O60347 775 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 PLEKHM2Q8IWE5 1019 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 LCORLQ8N3X6 602 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 AIDAQ96BJ3 306 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 OPTNQ96CV9 577 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 BEGAINQ9BUH8 593 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
NCBP3-207ENST00000577169 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.95■□□□□ 0.62
NCBP3-207ENST00000577169 PI4KBQ9UBF8 816 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 SNCAIPQ9Y6H5 919 aa18.95■□□□□ 0.62
NCBP3-207ENST00000577169 MYH7P12883 1935 aa18.94■□□□□ 0.62
NCBP3-207ENST00000577169 OTOFQ9HC10 1997 aa18.94■□□□□ 0.62
NCBP3-207ENST00000577169 FAM196BA6NMK8 535 aa18.94■□□□□ 0.62
NCBP3-207ENST00000577169 FOXP4Q8IVH2 680 aaPredicted RBP18.94■□□□□ 0.62
NCBP3-207ENST00000577169 REM2Q8IYK8 340 aaPredicted RBP18.94■□□□□ 0.62
NCBP3-207ENST00000577169 PUS7LQ9H0K6 701 aaKnown RBP18.94■□□□□ 0.62
NCBP3-207ENST00000577169 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
NCBP3-207ENST00000577169 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
NCBP3-207ENST00000577169 MBD4O95243 580 aa18.93■□□□□ 0.62
NCBP3-207ENST00000577169 ZBTB48P10074 688 aaPredicted RBP18.93■□□□□ 0.62
NCBP3-207ENST00000577169 TM4SF4P48230 202 aa18.93■□□□□ 0.62
NCBP3-207ENST00000577169 PRKAB2O43741 272 aa18.92■□□□□ 0.62
NCBP3-207ENST00000577169 ZFYP08048 801 aaPredicted RBP18.92■□□□□ 0.62
NCBP3-207ENST00000577169 SLC4A8Q2Y0W8 1093 aa18.92■□□□□ 0.62
NCBP3-207ENST00000577169 ERO1BQ86YB8 467 aa18.92■□□□□ 0.62
NCBP3-207ENST00000577169 SDR42E1Q8WUS8 393 aa18.92■□□□□ 0.62
NCBP3-207ENST00000577169 OSBP2Q969R2 916 aa18.92■□□□□ 0.62
NCBP3-207ENST00000577169 FSD1Q9BTV5 496 aa18.92■□□□□ 0.62
NCBP3-207ENST00000577169 MANSC4A6NHS7 340 aaPredicted RBP18.91■□□□□ 0.62
NCBP3-207ENST00000577169 SPDYE5A6NIY4 337 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 LRRFIP1Q32MZ4 808 aaKnown RBP18.91■□□□□ 0.62
NCBP3-207ENST00000577169 NOL9Q5SY16 702 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms