RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RCOR1Q9UKL0 485 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 YEATS2Q9ULM3 1422 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 KCNF1Q9H3M0 494 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 GOLGA6L7A0A1B0GV03 622 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 TACC1O75410 805 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 RESTQ13127 1097 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 NBPF11Q86T75 865 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 MLKLQ8NB16 471 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 RMND1Q9NWS8 449 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 EPHA10Q5JZY3 1008 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 HAUS7Q99871 368 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 DSCC1Q9BVC3 393 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 AK9Q5TCS8 1911 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 PLXNC1O60486 1568 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 EXOC5O00471 708 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 TOB2Q14106 344 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 TMEM266Q2M3C6 531 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 ZNF274Q96GC6 653 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 ZCCHC17Q9NP64 241 aaKnown RBP20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 ADCY9O60503 1353 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 SYNRGQ9UMZ2 1314 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 MAGEB6P1A0A0J9YX57 407 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 CKAP4Q07065 602 aaKnown RBP20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 MCM9Q9NXL9 1143 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
ATPAF1-214ENST00000576409 ANKRD65E5RJM6 399 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 TICAM2Q86XR7 235 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 SMIM23A6NLE4 172 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 SPTLC3Q9NUV7 552 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 TAF6LQ9Y6J9 622 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 CMA1P23946 247 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
ATPAF1-214ENST00000576409 CLCN6P51797 869 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 AMPD3Q01432 767 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 POLA2Q14181 598 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 EHBP1Q8NDI1 1231 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 CDC5LQ99459 802 aaKnown RBP20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 ZMYND10O75800 440 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 KRT83P78385 493 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 DNAJC10Q8IXB1 793 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 TMEM87AQ8NBN3 555 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 DTHD1Q6ZMT9 781 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 NAA15Q9BXJ9 866 aaKnown RBP20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 RAB34Q9BZG1 259 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 ST7Q9NRC1 585 aa20.19■□□□□ 0.82
ATPAF1-214ENST00000576409 TLDC2A0PJX2 215 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 ANKRD62A6NC57 917 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 TSPY3P0CV98 308 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 TSPY8P0CW00 308 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 NAPAP54920 295 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 LETM2Q2VYF4 491 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 LINC00301Q8NCQ3 95 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 ZPR1O75312 459 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 TMEM87BQ96K49 555 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 AATKQ6ZMQ8 1374 aa20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 TTC31Q49AM3 519 aaPredicted RBP20.18■□□□□ 0.82
ATPAF1-214ENST00000576409 DEXIO95424 95 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 BMP15O95972 392 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 HPDP32754 393 aaPredicted RBP20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 CEP57Q86XR8 500 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 PDE11AQ9HCR9 933 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 ENC1O14682 589 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 CTNNBL1Q8WYA6 563 aaPredicted RBP20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 FGFR1OPO95684 399 aaKnown RBP20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 MAP2K1Q02750 393 aaPredicted RBP20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 PTPROQ16827 1216 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 COPRSQ9NQ92 184 aa20.17■□□□□ 0.82
ATPAF1-214ENST00000576409 F8W031 263 aaPredicted RBP20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 KDRP35968 1356 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 ZBTB22O15209 634 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 KMT5BQ4FZB7 885 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 FAM114A1Q8IWE2 563 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 FAM76AQ8TAV0 307 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 GOLPH3LQ9H4A5 285 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 RTEL1Q9NZ71 1219 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 ZNF652Q9Y2D9 606 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 MAST3O60307 1309 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 VPS36Q86VN1 386 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 TEX13AQ9BXU3 409 aaPredicted RBP20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 CDC42BPAQ5VT25 1732 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 CARMIL3Q8ND23 1372 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 GSTTP1A0A1W2PQM5 241 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 CDC25AP30304 524 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 OTUD6BQ8N6M0 293 aa20.16■□□□□ 0.82
ATPAF1-214ENST00000576409 PTPN12Q05209 780 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 GPR161Q8N6U8 529 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 C6orf229H3BNL8 230 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms