RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CYP2D6P10635 497 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 MAP3K12Q12852 859 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
CCDC40-215ENST00000576033 MIGA2Q7L4E1 593 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 SAPCD2Q86UD0 394 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 KBTBD3Q8NAB2 608 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 TGFBRAP1Q8WUH2 860 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 CNKSR2Q8WXI2 1034 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 OSBP2Q969R2 916 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 FAM163AQ96GL9 167 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-215ENST00000576033 FSD1Q9BTV5 496 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 IL25Q9H293 177 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 GBA2Q9HCG7 927 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-215ENST00000576033 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 TLL2Q9Y6L7 1015 aa9.58□□□□□ -0.88
CCDC40-215ENST00000576033 MYH8P13535 1937 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 CYP2D7A0A087X1C5 515 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 A0A0D9SFI3 127 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 AOC2O75106 756 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 GLRX3O76003 335 aaKnown RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 HUNKP57058 714 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 GSTO1P78417 241 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 FAM227BQ96M60 508 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 MRIQ9BWK5 157 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 TMOD2Q9NZR1 351 aa9.57□□□□□ -0.88
CCDC40-215ENST00000576033 ZBTB47Q9UFB7 747 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 ANGEL1Q9UNK9 670 aaKnown RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 RPAP1Q9BWH6 1393 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-215ENST00000576033 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 TRIM6-TRIM34B2RNG4 842 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 VEGFBP49765 207 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 RRP1BQ14684 758 aaKnown RBP9.56□□□□□ -0.88
CCDC40-215ENST00000576033 TTF1Q15361 905 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-215ENST00000576033 DNAJC5GQ8N7S2 189 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 FAM151AQ8WW52 585 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 RILPL2Q969X0 211 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 IDI2Q9BXS1 227 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 OSBPL5Q9H0X9 879 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-215ENST00000576033 DNAJC18Q9H819 358 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 EPB41L4AQ9HCS5 686 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-215ENST00000576033 PALD1Q9ULE6 856 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
CCDC40-215ENST00000576033 PTPRFP10586 1907 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 RASSF10A6NK89 507 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 ERC2O15083 957 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 FOXP2O15409 715 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 RNF113AO15541 343 aaKnown RBP9.55□□□□□ -0.88
CCDC40-215ENST00000576033 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-215ENST00000576033 INPP5BP32019 993 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 GJA5P36382 358 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 MMP14P50281 582 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 PPP4CP60510 307 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 JAG1P78504 1218 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 NMIQ13287 307 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-215ENST00000576033 TTC22Q5TAA0 569 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 VPS53Q5VIR6 699 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 ZNF589Q86UQ0 364 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-215ENST00000576033 FAM83AQ86UY5 434 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 RASAL3Q86YV0 1011 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 ZSCAN29Q8IWY8 852 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-215ENST00000576033 CSRNP1Q96S65 589 aa9.55□□□□□ -0.88
CCDC40-215ENST00000576033 COL2A1P02458 1487 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-215ENST00000576033 FAM155AB1AL88 458 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-215ENST00000576033 GPAA1O43292 621 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 LDHCP07864 332 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 SDSP20132 328 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 USP5P45974 858 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 TNNI2P48788 182 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 TNFAIP1Q13829 316 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 VGLL4Q14135 290 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 FKBP1CQ5VVH2 108 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-215ENST00000576033 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 STK11IPQ8N1F8 1099 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 SLC44A5Q8NCS7 719 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 APPBP2Q92624 585 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-215ENST00000576033 KLRG1Q96E93 195 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 WRNIP1Q96S55 665 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC40-215ENST00000576033 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 ELP3Q9H9T3 547 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 PPP2R3BQ9Y5P8 575 aa9.54□□□□□ -0.88
CCDC40-215ENST00000576033 ENTPD3O75355 529 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 BAG3O95817 575 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 PLCD1P51178 756 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 DGKZQ13574 1117 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 UBE3CQ15386 1083 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 C2orf69Q8N8R5 385 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC40-215ENST00000576033 EVI5LQ96CN4 794 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
CCDC40-215ENST00000576033 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
CCDC40-215ENST00000576033 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
CCDC40-215ENST00000576033 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
CCDC40-215ENST00000576033 SNCAIPQ9Y6H5 919 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms