RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	DDX4	Q9NQI0	724 aa	Known RBP	13.12	□□□□□ -0.31
SLC12A4-215	ENST00000575857	PPP4R2	Q9NY27	417 aa		13.12	□□□□□ -0.31
SLC12A4-215	ENST00000575857	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
SLC12A4-215	ENST00000575857	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	BAG3	O95817	575 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	DGKZ	Q13574	1117 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	ZFPM1	Q8IX07	1006 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	MIGA1	Q8NAN2	632 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	FAM151A	Q8WW52	585 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	3e-7	■■□□□ 13.5
SLC12A4-215	ENST00000575857	TMEM39B	Q9GZU3	492 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	GBA2	Q9HCG7	927 aa	Predicted RBP	13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	TMOD2	Q9NZR1	351 aa		13.11	□□□□□ -0.31
SLC12A4-215	ENST00000575857	ENTPD3	O75355	529 aa		13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	TNNI2	P48788	182 aa		13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	RGS3	P49796	1198 aa		13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	MLLT1	Q03111	559 aa	Predicted RBP	13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	NOG	Q13253	232 aa		13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	SH3BP5L	Q7L8J4	393 aa		13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	EVI5L	Q96CN4	794 aa		13.1	□□□□□ -0.31
SLC12A4-215	ENST00000575857	ATRNL1	Q5VV63	1379 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	RNF113A	O15541	343 aa	Known RBP	13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	CA12	O43570	354 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	ZFY	P08048	801 aa	Predicted RBP	13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	GSPT1	P15170	499 aa	Known RBP	13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	PLCG2	P16885	1265 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	RGS19	P49795	217 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	KIF23	Q02241	960 aa	Predicted RBP	13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	TCP10	Q12799	353 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	ZSCAN25	Q6NSZ9	544 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	RGMB	Q6NW40	437 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	SKAP1	Q86WV1	359 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	CERS3	Q8IU89	383 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	TEX11	Q8IYF3	940 aa		13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	NOL10	Q9BSC4	688 aa	Known RBP	13.09	□□□□□ -0.31
SLC12A4-215	ENST00000575857	MAGEB6P1	A0A0J9YX57	407 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SLC34A2	O95436	690 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	ZNF157	P51786	506 aa	Predicted RBP	13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TTC22	Q5TAA0	569 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TICAM2	Q86XR7	235 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	LCORL	Q8N3X6	602 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	APPBP2	Q92624	585 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	OSBP2	Q969R2	916 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	FSD1	Q9BTV5	496 aa		13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	PUS7L	Q9H0K6	701 aa	Known RBP	13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	COL2A1	P02458	1487 aa	Predicted RBP	13.08	□□□□□ -0.32
SLC12A4-215	ENST00000575857	DDTL	A6NHG4	134 aa	Predicted RBP	13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TRPA1	O75762	1119 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	MBD4	O95243	580 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	FKBP1B	P68106	108 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	PICALM	Q13492	652 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	MAP3K11	Q16584	847 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SUPT20HL1	Q3ZLR7	823 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	ZMYM1	Q5SVZ6	1142 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	MOB2	Q70IA6	237 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	C2orf69	Q8N8R5	385 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TGFBRAP1	Q8WUH2	860 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	ARMT1	Q9H993	441 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	RNF186	Q9NXI6	227 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	MYH7	P12883	1935 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	FLT1	P17948	1338 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	PAPPA2	Q9BXP8	1791 aa		13.07	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TRIM6-TRIM34	B2RNG4	842 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857		M0R2C6	588 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	USP2	O75604	605 aa	Predicted RBP	13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	NF2	P35240	595 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	MAP3K10	Q02779	954 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	LDLRAD1	Q5T700	205 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	MAPKAPK5	Q8IW41	473 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SEC62	Q99442	399 aa	Known RBP	13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	FZD1	Q9UP38	647 aa		13.06	□□□□□ -0.32
SLC12A4-215	ENST00000575857	CASP8AP2	Q9UKL3	1982 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	PRKAB2	O43741	272 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SLC10A3	P09131	477 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SDS	P20132	328 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SOX10	P56693	466 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	RILPL2	Q969X0	211 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	CSRNP1	Q96S65	589 aa		13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	STRBP	Q96SI9	672 aa	Known RBP	13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.05	□□□□□ -0.32
SLC12A4-215	ENST00000575857	FOCAD	Q5VW36	1801 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	CDK5RAP2	Q96SN8	1893 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TNRC18	O15417	2968 aa	Predicted RBP	13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	UBE2Q2L	H0YL09	131 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	GPAA1	O43292	621 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SLURP2	P0DP57	97 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	PRKG1	Q13976	671 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	METTL16	Q86W50	562 aa	Known RBP	13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	RASAL3	Q86YV0	1011 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	SDR42E1	Q8WUS8	393 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	CCDC102A	Q96A19	550 aa		13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	ANGEL1	Q9UNK9	670 aa	Known RBP	13.04	□□□□□ -0.32
SLC12A4-215	ENST00000575857	DDX60L	Q5H9U9	1706 aa	Known RBP	13.03	□□□□□ -0.32
SLC12A4-215	ENST00000575857		A0A0D9SFI3	127 aa		13.03	□□□□□ -0.32
SLC12A4-215	ENST00000575857	FOXP2	O15409	715 aa		13.03	□□□□□ -0.32
SLC12A4-215	ENST00000575857	PPP1R12B	O60237	982 aa	Predicted RBP	13.03	□□□□□ -0.32
SLC12A4-215	ENST00000575857	TBC1D12	O60347	775 aa		13.03	□□□□□ -0.32

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