RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 DOCK2Q92608 1830 aa14.68□□□□□ -0.06
USP43-206ENST00000575346 GTF2A2P52657 109 aa14.67□□□□□ -0.06
USP43-206ENST00000575346 NOL9Q5SY16 702 aaKnown RBP14.67□□□□□ -0.06
USP43-206ENST00000575346 SH3BP5LQ7L8J4 393 aa14.67□□□□□ -0.06
USP43-206ENST00000575346 CTU1Q7Z7A3 348 aaKnown RBP14.67□□□□□ -0.06
USP43-206ENST00000575346 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
USP43-206ENST00000575346 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
USP43-206ENST00000575346 ZKSCAN4Q969J2 545 aaPredicted RBP14.67□□□□□ -0.06
USP43-206ENST00000575346 DDX4Q9NQI0 724 aaKnown RBP14.67□□□□□ -0.06
USP43-206ENST00000575346 TLR7Q9NYK1 1049 aaKnown RBP14.67□□□□□ -0.06
USP43-206ENST00000575346 RAI14Q9P0K7 980 aa14.67□□□□□ -0.06
USP43-206ENST00000575346 LRP2BPQ9P2M1 347 aa14.67□□□□□ -0.06
USP43-206ENST00000575346 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
USP43-206ENST00000575346 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 INPP5BP32019 993 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 PPATQ06203 517 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 PPIL2Q13356 520 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 C20orf194Q5TEA3 1177 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 KIF1BPQ96EK5 621 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 R3HDMLQ9H3Y0 253 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 SNRKQ9NRH2 765 aa14.66□□□□□ -0.06
USP43-206ENST00000575346 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
USP43-206ENST00000575346 DDTLA6NHG4 134 aaPredicted RBP14.65□□□□□ -0.06
USP43-206ENST00000575346 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 TBC1D12O60347 775 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 ZAP70P43403 619 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 PPP4CP60510 307 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 PKN2Q16513 984 aaKnown RBP14.65□□□□□ -0.06
USP43-206ENST00000575346 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
USP43-206ENST00000575346 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
USP43-206ENST00000575346 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 OTUD5Q96G74 571 aa14.65□□□□□ -0.06
USP43-206ENST00000575346 ZCCHC17Q9NP64 241 aaKnown RBP14.65□□□□□ -0.06
USP43-206ENST00000575346 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
USP43-206ENST00000575346 CCL15-CCL14A0A0B4J2E2 113 aa14.64□□□□□ -0.07
USP43-206ENST00000575346 IRF6O14896 467 aa14.64□□□□□ -0.07
USP43-206ENST00000575346 FKTNO75072 461 aa14.64□□□□□ -0.07
USP43-206ENST00000575346 CCL15Q16663 113 aa14.64□□□□□ -0.07
USP43-206ENST00000575346 AACSQ86V21 672 aa14.64□□□□□ -0.07
USP43-206ENST00000575346 CLASRPQ8N2M8 674 aaKnown RBP14.64□□□□□ -0.07
USP43-206ENST00000575346 TNRC18O15417 2968 aaPredicted RBP14.63□□□□□ -0.07
USP43-206ENST00000575346 BAG3O95817 575 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 CETPP11597 493 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 PLCG2P16885 1265 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 SNAPC2Q13487 334 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 PICALMQ13492 652 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.63□□□□□ -0.07
USP43-206ENST00000575346 OSBPL5Q9H0X9 879 aaPredicted RBP14.63□□□□□ -0.07
USP43-206ENST00000575346 IL1RAPL2Q9NP60 686 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 PIH1D3Q9NQM4 214 aaKnown RBP14.63□□□□□ -0.07
USP43-206ENST00000575346 KCNH4Q9UQ05 1017 aa14.63□□□□□ -0.07
USP43-206ENST00000575346 FOCADQ5VW36 1801 aa14.62□□□□□ -0.07
USP43-206ENST00000575346 CRHR2Q13324 411 aa14.62□□□□□ -0.07
USP43-206ENST00000575346 ADGRA1Q86SQ6 560 aa14.62□□□□□ -0.07
USP43-206ENST00000575346 ZSCAN29Q8IWY8 852 aaPredicted RBP14.62□□□□□ -0.07
USP43-206ENST00000575346 SCYL3Q8IZE3 742 aa14.62□□□□□ -0.07
USP43-206ENST00000575346 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
USP43-206ENST00000575346 NOL10Q9BSC4 688 aaKnown RBP14.62□□□□□ -0.07
USP43-206ENST00000575346 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP43-206ENST00000575346 CDK5RAP2Q96SN8 1893 aa14.61□□□□□ -0.07
USP43-206ENST00000575346 CTNND1O60716 968 aaKnown RBP14.61□□□□□ -0.07
USP43-206ENST00000575346 CERS3Q8IU89 383 aa14.61□□□□□ -0.07
USP43-206ENST00000575346 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
USP43-206ENST00000575346 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
USP43-206ENST00000575346 BTBD19C9JJ37 291 aa14.6□□□□□ -0.07
USP43-206ENST00000575346 CXCL11O14625 94 aa14.6□□□□□ -0.07
USP43-206ENST00000575346 TTF1Q15361 905 aaPredicted RBP14.6□□□□□ -0.07
USP43-206ENST00000575346 DHX36Q9H2U1 1008 aaKnown RBP14.6□□□□□ -0.07
USP43-206ENST00000575346 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
USP43-206ENST00000575346 ZFYVE28Q9HCC9 887 aa14.6□□□□□ -0.07
USP43-206ENST00000575346 DOCK1Q14185 1865 aa14.6□□□□□ -0.07
USP43-206ENST00000575346 IDH1O75874 414 aaKnown RBP14.59□□□□□ -0.07
USP43-206ENST00000575346 IFIT2P09913 472 aaKnown RBP14.59□□□□□ -0.07
USP43-206ENST00000575346 PTPRAP18433 802 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 CYP7A1P22680 504 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 SOX10P56693 466 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 MAP3K12Q12852 859 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 MOGSQ13724 837 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 TAF1CQ15572 869 aaPredicted RBP14.59□□□□□ -0.07
USP43-206ENST00000575346 FBXO46Q6PJ61 603 aaPredicted RBP14.59□□□□□ -0.07
USP43-206ENST00000575346 ANKRD23Q86SG2 305 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
USP43-206ENST00000575346 ERO1AQ96HE7 468 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 PI4KBQ9UBF8 816 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 HERC5Q9UII4 1024 aaKnown RBP14.59□□□□□ -0.07
USP43-206ENST00000575346 SIPA1L1O43166 1804 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 PHIPQ8WWQ0 1821 aa14.59□□□□□ -0.07
USP43-206ENST00000575346 TLR2O60603 784 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 SLURP2P0DP57 97 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 SP3Q02447 781 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.58□□□□□ -0.08
USP43-206ENST00000575346 PICK1Q9NRD5 415 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 FLT1P17948 1338 aa14.58□□□□□ -0.08
USP43-206ENST00000575346 APBB1O00213 710 aa14.57□□□□□ -0.08
USP43-206ENST00000575346 ATP5JP18859 108 aa14.57□□□□□ -0.08
USP43-206ENST00000575346 MAGEB6Q8N7X4 407 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms