RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 PNPLA7Q6ZV29 1317 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 SNAP23O00161 211 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 IFIT3O14879 490 aaKnown RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 TPM4P67936 248 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 SSRP1Q08945 709 aaKnown RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 TRIM29Q14134 588 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 STAG1Q8WVM7 1258 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 MYL10Q9BUA6 226 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 KRT23Q9C075 422 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 XPO4Q9C0E2 1151 aaKnown RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 SEC31BQ9NQW1 1179 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 IFNKQ9P0W0 207 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 CUTAO60888 179 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 IFNAR1P17181 557 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 GNAT2P19087 354 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 GNL2Q13823 731 aaKnown RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 CCAR2Q8N163 923 aaKnown RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 MPHOSPH8Q99549 860 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 UTP14AQ9BVJ6 771 aaKnown RBP10.34□□□□□ -0.75
NCBP3-204ENST00000574911 SLC26A6Q9BXS9 759 aa10.34□□□□□ -0.75
NCBP3-204ENST00000574911 BCORQ6W2J9 1755 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 RTL9Q8NET4 1388 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 PRKAB2O43741 272 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 LCORLQ8N3X6 602 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 WASF1Q92558 559 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 MTA3Q9BTC8 594 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 HSD3B7Q9H2F3 369 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 RREB1Q92766 1687 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
NCBP3-204ENST00000574911 UBE2Q2LH0YL09 131 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 SMC2O95347 1197 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 NCBP1Q09161 790 aaKnown RBP10.33□□□□□ -0.76
NCBP3-204ENST00000574911 MFSD6Q6ZSS7 791 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 ELOA2Q8IYF1 753 aaPredicted RBP10.33□□□□□ -0.76
NCBP3-204ENST00000574911 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 CCDC150Q8NCX0 1101 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 CCDC112Q8NEF3 446 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 CCDC87Q9NVE4 849 aa10.33□□□□□ -0.76
NCBP3-204ENST00000574911 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 CAMTA2O94983 1202 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 BCAMP50895 628 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 DHX8Q14562 1220 aaKnown RBP10.32□□□□□ -0.76
NCBP3-204ENST00000574911 PTPN14Q15678 1187 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 PARP10Q53GL7 1025 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 ARMCX5Q6P1M9 558 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 TMC6Q7Z403 805 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 NACAP1Q9BZK3 213 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 SLC4A4Q9Y6R1 1079 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 MMP1P03956 469 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 GUCY1A2P33402 732 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 FANCCQ00597 558 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 CCDC152Q4G0S7 254 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 KRBA2Q6ZNG9 492 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 NOSTRINQ8IVI9 506 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 ARID3AQ99856 593 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 CHD4Q14839 1912 aa10.32□□□□□ -0.76
NCBP3-204ENST00000574911 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 NTSR2O95665 410 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 IGHMBP2P38935 993 aaKnown RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 KCNJ6P48051 423 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 TDO2P48775 406 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 TOB1P50616 345 aaPredicted RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 PNOCQ13519 176 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 WTAPQ15007 396 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 LONRF3Q496Y0 759 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 ISM2Q6H9L7 571 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 METTL16Q86W50 562 aaKnown RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 STK11IPQ8N1F8 1099 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 LAMB2P55268 1798 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 COL22A1Q8NFW1 1626 aaPredicted RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 CRKLP46109 303 aaKnown RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 RCAN1P53805 252 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 RTN1Q16799 776 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 KRI1Q8N9T8 703 aaKnown RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 TRMT1Q9NXH9 659 aaKnown RBP10.31□□□□□ -0.76
NCBP3-204ENST00000574911 KCNH3Q9ULD8 1083 aa10.31□□□□□ -0.76
NCBP3-204ENST00000574911 BTBD18B2RXH4 712 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 MYL5Q02045 173 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 E4F1Q66K89 784 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 FOXP1Q9H334 677 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 KIF2AO00139 706 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 MYO1BO43795 1136 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 DEXIO95424 95 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 LMOD1P29536 600 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 CHRNDQ07001 517 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 SART3Q15020 963 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms