RNA–Protein interactions for RNA: ENST00000574639.1

TFAP4-204, Transcript of transcription factor AP-4, human

TSL 5

Gene TFAP4, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-204	ENST00000574639	ADGRA2	Q96PE1	1338 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	MAST2	Q6P0Q8	1798 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	RGS3	P49796	1198 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	SOX10	P56693	466 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	DCAF15	Q66K64	600 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	OTUD7B	Q6GQQ9	843 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	SPATA5	Q8NB90	893 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	PTPN22	Q9Y2R2	807 aa		13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	KIAA0100	Q14667	2235 aa	Known RBP	13.92	□□□□□ -0.18
TFAP4-204	ENST00000574639	MROH7-TTC4	A0A0A0MT08	1334 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	SP3	Q02447	781 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	TNNI3K	Q59H18	835 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	CD99L2	Q8TCZ2	262 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	NEUROD6	Q96NK8	337 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	ABCF2	Q9UG63	623 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	FPGT-TNNI3K	V9GXZ4	949 aa		13.91	□□□□□ -0.18
TFAP4-204	ENST00000574639	TLR2	O60603	784 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	CETP	P11597	493 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	CTGF	P29279	349 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	BTD	P43251	543 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	GPAT2	Q6NUI2	795 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	C17orf99	Q6UX52	265 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	ERICH6	Q7L0X2	663 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	ERO1A	Q96HE7	468 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	DBNDD2	Q9BQY9	259 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	C1orf115	Q9H7X2	142 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	TRIM17	Q9Y577	477 aa		13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	COL2A1	P02458	1487 aa	Predicted RBP	13.9	□□□□□ -0.18
TFAP4-204	ENST00000574639	TBC1D12	O60347	775 aa		13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	CYP2E1	P05181	493 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	SNAPC2	Q13487	334 aa		13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	CEP85	Q6P2H3	762 aa		13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	EAF2	Q96CJ1	260 aa	Predicted RBP	13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	AFG3L2	Q9Y4W6	797 aa		13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	MYH1	P12882	1939 aa		13.89	□□□□□ -0.19
TFAP4-204	ENST00000574639	LOC285556	D6RIA3	1793 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	MAP4K4	O95819	1239 aa	Predicted RBP	13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	UQCRFS1P1	P0C7P4	283 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	PTPRA	P18433	802 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	PPP4C	P60510	307 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	RRP1B	Q14684	758 aa	Known RBP	13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	TAF1C	Q15572	869 aa	Predicted RBP	13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	ANKRD23	Q86SG2	305 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	ADGRA1	Q86SQ6	560 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	ARMC5	Q96C12	935 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	ZFYVE28	Q9HCC9	887 aa		13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	DBNL	Q9UJU6	430 aa	Known RBP	13.88	□□□□□ -0.19
TFAP4-204	ENST00000574639	CXCL11	O14625	94 aa		13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	SURF6	O75683	361 aa	Known RBP	13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	METTL16	Q86W50	562 aa	Known RBP	13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	DZIP1	Q86YF9	867 aa	Known RBP	13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	SLF2	Q8IX21	1173 aa		13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	SIRT2	Q8IXJ6	389 aa		13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	SCYL3	Q8IZE3	742 aa		13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	PANK1	Q8TE04	598 aa		13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	ARHGAP39	Q9C0H5	1083 aa		13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	TLR7	Q9NYK1	1049 aa	Known RBP	13.87	□□□□□ -0.19
TFAP4-204	ENST00000574639	IGSF3	O75054	1194 aa		13.86	□□□□□ -0.19
TFAP4-204	ENST00000574639	LACTB	P83111	547 aa	Predicted RBP	13.86	□□□□□ -0.19
TFAP4-204	ENST00000574639	EFCC1	Q9HA90	598 aa		13.86	□□□□□ -0.19
TFAP4-204	ENST00000574639	SNRK	Q9NRH2	765 aa		13.86	□□□□□ -0.19
TFAP4-204	ENST00000574639		A0A0G2JLL6	359 aa	Predicted RBP	13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	POTEF	A5A3E0	1075 aa		13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	CTNND1	O60716	968 aa	Known RBP	13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	LDHC	P07864	332 aa		13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	BCR	P11274	1271 aa		13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	ITPRIP	Q8IWB1	547 aa		13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	PIH1D3	Q9NQM4	214 aa	Known RBP	13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.85	□□□□□ -0.19
TFAP4-204	ENST00000574639	PDHX	O00330	501 aa		13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	ZAP70	P43403	619 aa		13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	GSTO1	P78417	241 aa		13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	PICALM	Q13492	652 aa		13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	ZBTB40	Q9NUA8	1239 aa		13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	ZHX2	Q9Y6X8	837 aa		13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	DDX60L	Q5H9U9	1706 aa	Known RBP	13.84	□□□□□ -0.19
TFAP4-204	ENST00000574639	PLXNB2	O15031	1838 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	JAG1	P78504	1218 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	GORAB	Q5T7V8	394 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	FTSJ3	Q8IY81	847 aa	Known RBP	13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	ZNF333	Q96JL9	665 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	DNAJC18	Q9H819	358 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	RAI14	Q9P0K7	980 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	SLC45A1	Q9Y2W3	748 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	PTCH2	Q9Y6C5	1203 aa		13.83	□□□□□ -0.2
TFAP4-204	ENST00000574639	FAM196B	A6NMK8	535 aa		13.82	□□□□□ -0.2
TFAP4-204	ENST00000574639	CCDC158	Q5M9N0	1113 aa		13.82	□□□□□ -0.2
TFAP4-204	ENST00000574639	CCDC84	Q86UT8	332 aa	Predicted RBP	13.82	□□□□□ -0.2
TFAP4-204	ENST00000574639	TRIM47	Q96LD4	638 aa		13.82	□□□□□ -0.2
TFAP4-204	ENST00000574639	ANTXR1	Q9H6X2	564 aa		13.82	□□□□□ -0.2
TFAP4-204	ENST00000574639	LRP2BP	Q9P2M1	347 aa		13.82	□□□□□ -0.2
TFAP4-204	ENST00000574639	CPA4	Q9UI42	421 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms