RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MAST3O60307 1309 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
SMG6-215ENST00000574501 CTAGE15A4D2H0 777 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 PRC1O43663 620 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 CTAGE8P0CG41 777 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 TADA2BQ86TJ2 420 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 CTAGE6Q86UF2 777 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 CTAGE4Q8IX94 777 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 AFAP1L1Q8TED9 768 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 RIN2Q8WYP3 895 aaPredicted RBP16.43■□□□□ 0.22
SMG6-215ENST00000574501 PALLDQ8WX93 1383 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 MRC1P22897 1456 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 M0R2C6 588 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 SYF2O95926 243 aaKnown RBP16.43■□□□□ 0.22
SMG6-215ENST00000574501 PRR29P0C7W0 189 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 NR1I3Q14994 352 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 DNAJC21Q5F1R6 531 aaKnown RBP16.43■□□□□ 0.22
SMG6-215ENST00000574501 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 MED15Q96RN5 788 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 TNRQ92752 1358 aa16.43■□□□□ 0.22
SMG6-215ENST00000574501 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 PPP6R2O75170 966 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 CHRM1P11229 460 aaPredicted RBP16.42■□□□□ 0.22
SMG6-215ENST00000574501 NCAPH2Q6IBW4 605 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 GDAP1L1Q96MZ0 367 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 MED4Q9NPJ6 270 aa16.42■□□□□ 0.22
SMG6-215ENST00000574501 MED1Q15648 1581 aaPredicted RBP16.42■□□□□ 0.22
SMG6-215ENST00000574501 RXRAP19793 462 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
SMG6-215ENST00000574501 TIMM10P62072 90 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 IGSF22Q8N9C0 903 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 MDM2Q00987 491 aaPredicted RBP16.41■□□□□ 0.22
SMG6-215ENST00000574501 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
SMG6-215ENST00000574501 PDIA6Q15084 440 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 MMS22LQ6ZRQ5 1243 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 PPFIBP1Q86W92 1011 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 LRRC59Q96AG4 307 aaKnown RBP16.41■□□□□ 0.22
SMG6-215ENST00000574501 PANX2Q96RD6 677 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 ACBD3Q9H3P7 528 aa16.41■□□□□ 0.22
SMG6-215ENST00000574501 DDX21Q9NR30 783 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMG6-215ENST00000574501 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 LIG3P49916 1009 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 SLC9C2Q5TAH2 1124 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 A0A087WUV0 522 aaPredicted RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 CPP00450 1065 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 POSTNQ15063 836 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 KRT40Q6A162 431 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 NUTM2AQ8IVF1 878 aaPredicted RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 SUGP1Q8IWZ8 645 aaKnown RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 ENOX1Q8TC92 643 aaKnown RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 KAT2BQ92831 832 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 PHKBQ93100 1093 aa16.4■□□□□ 0.22
SMG6-215ENST00000574501 NAPGQ99747 312 aaPredicted RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 HOOK1Q9UJC3 728 aaKnown RBP16.4■□□□□ 0.22
SMG6-215ENST00000574501 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
SMG6-215ENST00000574501 GRIN1Q05586 938 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 ANKRD24Q8TF21 1146 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 A0A1B0GTH6 734 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 POLR2DO15514 142 aaKnown RBP16.39■□□□□ 0.21
SMG6-215ENST00000574501 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
SMG6-215ENST00000574501 CASP14P31944 242 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 ANTXR2P58335 489 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 PIP4K2BP78356 416 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 SLIT1O75093 1534 aa16.39■□□□□ 0.21
SMG6-215ENST00000574501 FAM237AA0A1B0GTK4 181 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 EXOC5O00471 708 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 STX17P56962 302 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 HSP90AB3PQ58FF7 597 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.38■□□□□ 0.21
SMG6-215ENST00000574501 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 SEC31BQ9NQW1 1179 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 RNF113AO15541 343 aaKnown RBP16.38■□□□□ 0.21
SMG6-215ENST00000574501 ERLIN2O94905 339 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 CCT5P48643 541 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 WHAMMP3Q1A5X7 153 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 KLHL10Q6JEL2 608 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
SMG6-215ENST00000574501 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms