RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 CDAN1Q8IWY9 1227 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 ANKRD13AQ8IZ07 590 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 DNAJC2Q99543 621 aaKnown RBP11.88□□□□□ -0.51
NDE1-210ENST00000574163 RWDD1Q9H446 243 aaPredicted RBP11.88□□□□□ -0.51
NDE1-210ENST00000574163 PAG1Q9NWQ8 432 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 DOCK1Q14185 1865 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
NDE1-210ENST00000574163 GOLIM4O00461 696 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
NDE1-210ENST00000574163 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
NDE1-210ENST00000574163 ZBTB48P10074 688 aaPredicted RBP11.87□□□□□ -0.51
NDE1-210ENST00000574163 CYP7A1P22680 504 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 GRM1Q13255 1194 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 SMC5Q8IY18 1101 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
NDE1-210ENST00000574163 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.87□□□□□ -0.511e-7■■■■■ 27.3
NDE1-210ENST00000574163 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
NDE1-210ENST00000574163 MYH1P12882 1939 aa11.87□□□□□ -0.51
NDE1-210ENST00000574163 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 ERC2O15083 957 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 AOC2O75106 756 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
NDE1-210ENST00000574163 PDE6AP16499 860 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 TCP10Q12799 353 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 PRKG1Q13976 671 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 ADGRA1Q86SQ6 560 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 MAGEB6Q8N7X4 407 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 ZNF341Q9BYN7 854 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 DDX4Q9NQI0 724 aaKnown RBP11.86□□□□□ -0.51
NDE1-210ENST00000574163 CSADQ9Y600 493 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
NDE1-210ENST00000574163 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
NDE1-210ENST00000574163 MX1P20591 662 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 SPRYD7Q5W111 196 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
NDE1-210ENST00000574163 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
NDE1-210ENST00000574163 WNK4Q96J92 1243 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
NDE1-210ENST00000574163 SAGE1Q9NXZ1 904 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
NDE1-210ENST00000574163 ZNF112Q9UJU3 913 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 ATAD5Q96QE3 1844 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 FLT1P17948 1338 aa11.85□□□□□ -0.51
NDE1-210ENST00000574163 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 ADD2P35612 726 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 MAP3K10Q02779 954 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 SREBF2Q12772 1141 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 PICALMQ13492 652 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 VGLL4Q14135 290 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 ZSCAN25Q6NSZ9 544 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 SH3BP5LQ7L8J4 393 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 ZSCAN29Q8IWY8 852 aaPredicted RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 EDC3Q96F86 508 aaKnown RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 CLMNQ96JQ2 1002 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 DHX36Q9H2U1 1008 aaKnown RBP11.84□□□□□ -0.51
NDE1-210ENST00000574163 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
NDE1-210ENST00000574163 DDTLA6NHG4 134 aaPredicted RBP11.83□□□□□ -0.52
NDE1-210ENST00000574163 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
NDE1-210ENST00000574163 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 TBC1D12O60347 775 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 UBE3CQ15386 1083 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 LRRFIP1Q32MZ4 808 aaKnown RBP11.83□□□□□ -0.52
NDE1-210ENST00000574163 ZFPM1Q8IX07 1006 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 PI4K2BQ8TCG2 481 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 BCL11AQ9H165 835 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 SNCAIPQ9Y6H5 919 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 PTPRFP10586 1907 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
NDE1-210ENST00000574163 PHIPQ8WWQ0 1821 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 MAGEB6P1A0A0J9YX57 407 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 FOXN1O15353 648 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 ZFYP08048 801 aaPredicted RBP11.82□□□□□ -0.52
NDE1-210ENST00000574163 INHBEP58166 350 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 ERO1BQ86YB8 467 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 MIGA1Q8NAN2 632 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
NDE1-210ENST00000574163 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 ZIC5Q96T25 663 aa11.82□□□□□ -0.52
NDE1-210ENST00000574163 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
NDE1-210ENST00000574163 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
NDE1-210ENST00000574163 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms