RNA–Protein interactions for RNA: ENST00000574060.1

RNF213-218, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-218ENST00000574060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.19
RNF213-218ENST00000574060 SLC10A4Q96EP9 437 aa16.26■□□□□ 0.19
RNF213-218ENST00000574060 BEGAINQ9BUH8 593 aa16.26■□□□□ 0.19
RNF213-218ENST00000574060 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
RNF213-218ENST00000574060 PAG1Q9NWQ8 432 aa16.26■□□□□ 0.19
RNF213-218ENST00000574060 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.19
RNF213-218ENST00000574060 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
RNF213-218ENST00000574060 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
RNF213-218ENST00000574060 KIF23Q02241 960 aaPredicted RBP16.25■□□□□ 0.19
RNF213-218ENST00000574060 PICALMQ13492 652 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 ZFPM1Q8IX07 1006 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 TEX11Q8IYF3 940 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
RNF213-218ENST00000574060 CLMNQ96JQ2 1002 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
RNF213-218ENST00000574060 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
RNF213-218ENST00000574060 ATRNL1Q5VV63 1379 aa16.25■□□□□ 0.19
RNF213-218ENST00000574060 MYH7P12883 1935 aa16.24■□□□□ 0.19
RNF213-218ENST00000574060 CA12O43570 354 aa16.24■□□□□ 0.19
RNF213-218ENST00000574060 ZBTB48P10074 688 aaPredicted RBP16.24■□□□□ 0.19
RNF213-218ENST00000574060 MAP3K9P80192 1104 aa16.24■□□□□ 0.19
RNF213-218ENST00000574060 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
RNF213-218ENST00000574060 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
RNF213-218ENST00000574060 CSADQ9Y600 493 aa16.24■□□□□ 0.19
RNF213-218ENST00000574060 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 FOXN1O15353 648 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 VGLL4Q14135 290 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 SPRYD7Q5W111 196 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.23■□□□□ 0.19
RNF213-218ENST00000574060 MIGA2Q7L4E1 593 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 SH3BP5LQ7L8J4 393 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 EDC3Q96F86 508 aaKnown RBP16.23■□□□□ 0.19
RNF213-218ENST00000574060 WRNIP1Q96S55 665 aa16.23■□□□□ 0.19
RNF213-218ENST00000574060 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■■□□ 18.5
RNF213-218ENST00000574060 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
RNF213-218ENST00000574060 DDTLA6NHG4 134 aaPredicted RBP16.22■□□□□ 0.19
RNF213-218ENST00000574060 PDE6AP16499 860 aa16.22■□□□□ 0.19
RNF213-218ENST00000574060 CTCFP49711 727 aaPredicted RBP16.22■□□□□ 0.19
RNF213-218ENST00000574060 MIGA1Q8NAN2 632 aa16.22■□□□□ 0.19
RNF213-218ENST00000574060 WNK4Q96J92 1243 aa16.22■□□□□ 0.19
RNF213-218ENST00000574060 ERC2O15083 957 aa16.21■□□□□ 0.19
RNF213-218ENST00000574060 MX1P20591 662 aa16.21■□□□□ 0.19
RNF213-218ENST00000574060 DYNLL1P63167 89 aaKnown RBP16.21■□□□□ 0.19
RNF213-218ENST00000574060 SREBF2Q12772 1141 aa16.21■□□□□ 0.19
RNF213-218ENST00000574060 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
RNF213-218ENST00000574060 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
RNF213-218ENST00000574060 ELP3Q9H9T3 547 aa16.21■□□□□ 0.19
RNF213-218ENST00000574060 ZNF112Q9UJU3 913 aa16.21■□□□□ 0.19
RNF213-218ENST00000574060 FLT1P17948 1338 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 TCRBV5S4A2TA0A5A2 114 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 ADD2P35612 726 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
RNF213-218ENST00000574060 MAP3K10Q02779 954 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 TSHZ3Q63HK5 1081 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 RIOK1Q9BRS2 568 aaKnown RBP16.2■□□□□ 0.18
RNF213-218ENST00000574060 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
RNF213-218ENST00000574060 SAGE1Q9NXZ1 904 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
RNF213-218ENST00000574060 SNCAIPQ9Y6H5 919 aa16.2■□□□□ 0.18
RNF213-218ENST00000574060 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 MANSC4A6NHS7 340 aaPredicted RBP16.19■□□□□ 0.18
RNF213-218ENST00000574060 SPDYE5A6NIY4 337 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 TBC1D12O60347 775 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
RNF213-218ENST00000574060 IGHDP01880 384 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 TM4SF4P48230 202 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 NOL9Q5SY16 702 aaKnown RBP16.19■□□□□ 0.18
RNF213-218ENST00000574060 MAPKAPK5Q8IW41 473 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
RNF213-218ENST00000574060 OTUD7AQ8TE49 926 aaPredicted RBP16.19■□□□□ 0.18
RNF213-218ENST00000574060 ZKSCAN4Q969J2 545 aaPredicted RBP16.19■□□□□ 0.18
RNF213-218ENST00000574060 MYH1P12882 1939 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 SIPA1L1O43166 1804 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 HSPA8P11142 646 aaKnown RBP16.18■□□□□ 0.18
RNF213-218ENST00000574060 INPP5BP32019 993 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 GJA5P36382 358 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 USP5P45974 858 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 INHBEP58166 350 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 UBE3CQ15386 1083 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 KBTBD3Q8NAB2 608 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
RNF213-218ENST00000574060 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 NAV1Q8NEY1 1877 aa16.18■□□□□ 0.18
RNF213-218ENST00000574060 PHF20L1A8MW92 1017 aa16.17■□□□□ 0.18
RNF213-218ENST00000574060 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
RNF213-218ENST00000574060 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
RNF213-218ENST00000574060 PRDM10Q9NQV6 1147 aa16.17■□□□□ 0.18
RNF213-218ENST00000574060 RNF186Q9NXI6 227 aa16.17■□□□□ 0.18
RNF213-218ENST00000574060 PI4KBQ9UBF8 816 aa16.17■□□□□ 0.18
RNF213-218ENST00000574060 STAP2Q9UGK3 403 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms