RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SH3TC2Q8TF17 1288 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 XAGE2Q96GT9 111 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 NEUROD6Q96NK8 337 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 MROH7-TTC4A0A0A0MT08 1334 aa15.06■□□□□ 0
CCDC40-210ENST00000573903 TFCP2Q12800 502 aa15.05■□□□□ -0
CCDC40-210ENST00000573903 PICALMQ13492 652 aa15.05■□□□□ -0
CCDC40-210ENST00000573903 MTX1Q13505 466 aa15.05■□□□□ -0
CCDC40-210ENST00000573903 FASTKD5Q7L8L6 764 aaKnown RBP15.05■□□□□ -0
CCDC40-210ENST00000573903 RAET1EQ8TD07 263 aa15.05■□□□□ -0
CCDC40-210ENST00000573903 SRRDQ9UH36 339 aa15.05■□□□□ -0
CCDC40-210ENST00000573903 CENPFP49454 3210 aa15.05■□□□□ -0
CCDC40-210ENST00000573903 RFX7Q2KHR2 1363 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 ATRNL1Q5VV63 1379 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 MYPNQ86TC9 1320 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 GSTO1P78417 241 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 HNRNPUQ00839 825 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC40-210ENST00000573903 GADL1Q6ZQY3 521 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 ZFPM1Q8IX07 1006 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
CCDC40-210ENST00000573903 ZHX2Q9Y6X8 837 aa15.04■□□□□ -0
CCDC40-210ENST00000573903 ADGRA2Q96PE1 1338 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
CCDC40-210ENST00000573903 GNAI2P04899 355 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 LDHCP07864 332 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 OSBPP22059 807 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 FCGRTP55899 365 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 MECOMQ03112 1051 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 G3BP1Q13283 466 aaKnown RBP eCLIP15.03■□□□□ -0
CCDC40-210ENST00000573903 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
CCDC40-210ENST00000573903 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
CCDC40-210ENST00000573903 TRIM47Q96LD4 638 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 MGAMO43451 1857 aa15.03■□□□□ -0
CCDC40-210ENST00000573903 PTPRFP10586 1907 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 PHF20L1A8MW92 1017 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 CTNND1O60716 968 aaKnown RBP15.02■□□□□ -0
CCDC40-210ENST00000573903 MAP4K4O95819 1239 aaPredicted RBP15.02■□□□□ -0
CCDC40-210ENST00000573903 PTPRAP18433 802 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 GRK4P32298 578 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 UBXN2AP68543 259 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 MOGSQ13724 837 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 ATF7IPQ6VMQ6 1270 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 SPATA5Q8NB90 893 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 NKX2-3Q8TAU0 364 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 SMCR8Q8TEV9 937 aaPredicted RBP15.02■□□□□ -0
CCDC40-210ENST00000573903 NOL10Q9BSC4 688 aaKnown RBP15.02■□□□□ -0
CCDC40-210ENST00000573903 RAI14Q9P0K7 980 aa15.02■□□□□ -0
CCDC40-210ENST00000573903 BIN2Q9UBW5 565 aaPredicted RBP15.02■□□□□ -0
CCDC40-210ENST00000573903 GPR75-ASB3A0A0A6YYF3 556 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 DDTLA6NHG4 134 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-210ENST00000573903 CYP2C8P10632 490 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 TRIM27P14373 513 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 HABP4Q5JVS0 413 aaKnown RBP15.01□□□□□ -0.01
CCDC40-210ENST00000573903 GPAT2Q6NUI2 795 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 SH3BP5LQ7L8J4 393 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
CCDC40-210ENST00000573903 HMG20BQ9P0W2 317 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 SLC45A1Q9Y2W3 748 aa15.01□□□□□ -0.01
CCDC40-210ENST00000573903 TRIM75PA6NK02 468 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 UQCRFS1P1P0C7P4 283 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 BCRP11274 1271 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 CTGFP29279 349 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 ARID4AP29374 1257 aaPredicted RBP15□□□□□ -0.01
CCDC40-210ENST00000573903 MAP3K10Q02779 954 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 CLUAP1Q96AJ1 413 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC40-210ENST00000573903 LRP2BPQ9P2M1 347 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 PNMA3Q9UL41 463 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 PHIPQ8WWQ0 1821 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 MAST2Q6P0Q8 1798 aa15□□□□□ -0.01
CCDC40-210ENST00000573903 COL2A1P02458 1487 aaPredicted RBP15□□□□□ -0.01
CCDC40-210ENST00000573903 ATAD5Q96QE3 1844 aa14.99□□□□□ -0.01
CCDC40-210ENST00000573903 MKI67P46013 3256 aaKnown RBP14.99□□□□□ -0.01
CCDC40-210ENST00000573903 TBC1D12O60347 775 aa14.99□□□□□ -0.01
CCDC40-210ENST00000573903 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
CCDC40-210ENST00000573903 PRKCZQ05513 592 aa14.99□□□□□ -0.01
CCDC40-210ENST00000573903 OS9Q13438 667 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-210ENST00000573903 SLAIN1Q8ND83 568 aa14.99□□□□□ -0.01
CCDC40-210ENST00000573903 NSUN4Q96CB9 384 aaKnown RBP14.99□□□□□ -0.01
CCDC40-210ENST00000573903 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-210ENST00000573903 BRCA2P51587 3418 aa14.99□□□□□ -0.01
CCDC40-210ENST00000573903 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 PNMA6EA0A0J9YXQ4 647 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 RHBDL3P58872 404 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 MTFR1Q15390 333 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 TTC39AQ5SRH9 613 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 PI16Q6UXB8 463 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 RNF208Q9H0X6 261 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 AGTPBP1Q9UPW5 1226 aa14.98□□□□□ -0.01
CCDC40-210ENST00000573903 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
CCDC40-210ENST00000573903 BCAR3O75815 825 aa14.97□□□□□ -0.01
CCDC40-210ENST00000573903 BAG3O95817 575 aa14.97□□□□□ -0.01
CCDC40-210ENST00000573903 CCL5P13501 91 aa14.97□□□□□ -0.01
CCDC40-210ENST00000573903 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC40-210ENST00000573903 CCDC158Q5M9N0 1113 aa14.97□□□□□ -0.01
CCDC40-210ENST00000573903 TBC1D9Q6ZT07 1266 aa14.97□□□□□ -0.01
CCDC40-210ENST00000573903 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms