RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 GNAI3P08754 354 aa27.26■■□□□ 1.95
SNF8-216ENST00000573795 MAP3K10Q02779 954 aa27.26■■□□□ 1.95
SNF8-216ENST00000573795 DZIP1Q86YF9 867 aaKnown RBP27.26■■□□□ 1.95
SNF8-216ENST00000573795 ABCF2Q9UG63 623 aa27.26■■□□□ 1.95
SNF8-216ENST00000573795 MGAMO43451 1857 aa27.25■■□□□ 1.95
SNF8-216ENST00000573795 DDTLA6NHG4 134 aaPredicted RBP27.25■■□□□ 1.95
SNF8-216ENST00000573795 CCER2I3L3R5 266 aa27.25■■□□□ 1.95
SNF8-216ENST00000573795 CXCL11O14625 94 aa27.25■■□□□ 1.95
SNF8-216ENST00000573795 PRMT2P55345 433 aa27.25■■□□□ 1.95
SNF8-216ENST00000573795 SCYL3Q8IZE3 742 aa27.25■■□□□ 1.95
SNF8-216ENST00000573795 MROH7-TTC4A0A0A0MT08 1334 aa27.24■■□□□ 1.95
SNF8-216ENST00000573795 BTDP43251 543 aa27.24■■□□□ 1.95
SNF8-216ENST00000573795 PSMC4P43686 418 aa27.24■■□□□ 1.95
SNF8-216ENST00000573795 SLC4A8Q2Y0W8 1093 aa27.24■■□□□ 1.95
SNF8-216ENST00000573795 GCC1Q96CN9 775 aa27.24■■□□□ 1.95
SNF8-216ENST00000573795 SRRDQ9UH36 339 aa27.24■■□□□ 1.95
SNF8-216ENST00000573795 BCRP11274 1271 aa27.23■■□□□ 1.95
SNF8-216ENST00000573795 PTPRAP18433 802 aa27.23■■□□□ 1.95
SNF8-216ENST00000573795 OSBPP22059 807 aa27.23■■□□□ 1.95
SNF8-216ENST00000573795 RHBDL3P58872 404 aa27.23■■□□□ 1.95
SNF8-216ENST00000573795 AKAP2Q9Y2D5 859 aa27.23■■□□□ 1.95
SNF8-216ENST00000573795 A0A0G2JLL6 359 aaPredicted RBP27.22■■□□□ 1.95
SNF8-216ENST00000573795 CYP2C8P10632 490 aa27.22■■□□□ 1.95
SNF8-216ENST00000573795 TRIM27P14373 513 aa27.22■■□□□ 1.95
SNF8-216ENST00000573795 MECOMQ03112 1051 aa27.22■■□□□ 1.95
SNF8-216ENST00000573795 MVPQ14764 893 aaKnown RBP27.22■■□□□ 1.95
SNF8-216ENST00000573795 PI16Q6UXB8 463 aa27.22■■□□□ 1.95
SNF8-216ENST00000573795 PRRT2Q7Z6L0 340 aaPredicted RBP27.22■■□□□ 1.95
SNF8-216ENST00000573795 AFG3L2Q9Y4W6 797 aa27.22■■□□□ 1.95
SNF8-216ENST00000573795 ZHX2Q9Y6X8 837 aa27.22■■□□□ 1.95
SNF8-216ENST00000573795 PICALMQ13492 652 aa27.21■■□□□ 1.95
SNF8-216ENST00000573795 MTFR1Q15390 333 aa27.21■■□□□ 1.95
SNF8-216ENST00000573795 PARK7Q99497 189 aaKnown RBP27.21■■□□□ 1.95
SNF8-216ENST00000573795 HMG20BQ9P0W2 317 aa27.21■■□□□ 1.95
SNF8-216ENST00000573795 GPR75-ASB3A0A0A6YYF3 556 aa27.2■■□□□ 1.94
SNF8-216ENST00000573795 HABP4Q5JVS0 413 aaKnown RBP27.2■■□□□ 1.94
SNF8-216ENST00000573795 SPTY2D1Q68D10 685 aaPredicted RBP27.2■■□□□ 1.94
SNF8-216ENST00000573795 ZSCAN29Q8IWY8 852 aaPredicted RBP27.2■■□□□ 1.94
SNF8-216ENST00000573795 SLF2Q8IX21 1173 aa27.2■■□□□ 1.94
SNF8-216ENST00000573795 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.2■■□□□ 1.94
SNF8-216ENST00000573795 PNMA6EA0A0J9YXQ4 647 aa27.19■■□□□ 1.94
SNF8-216ENST00000573795 ERICH6Q7L0X2 663 aa27.19■■□□□ 1.94
SNF8-216ENST00000573795 SHISA4Q96DD7 197 aa27.19■■□□□ 1.94
SNF8-216ENST00000573795 PICK1Q9NRD5 415 aa27.19■■□□□ 1.94
SNF8-216ENST00000573795 MYPNQ86TC9 1320 aa27.18■■□□□ 1.94
SNF8-216ENST00000573795 BCAR3O75815 825 aa27.18■■□□□ 1.94
SNF8-216ENST00000573795 FMNL1O95466 1100 aaPredicted RBP27.18■■□□□ 1.94
SNF8-216ENST00000573795 NSUN4Q96CB9 384 aaKnown RBP27.18■■□□□ 1.94
SNF8-216ENST00000573795 NEUROD6Q96NK8 337 aa27.18■■□□□ 1.94
SNF8-216ENST00000573795 CEP290O15078 2479 aa27.17■■□□□ 1.94
SNF8-216ENST00000573795 ARID4AP29374 1257 aaPredicted RBP27.17■■□□□ 1.94
SNF8-216ENST00000573795 ATF7IPQ6VMQ6 1270 aa27.17■■□□□ 1.94
SNF8-216ENST00000573795 TBC1D9Q6ZT07 1266 aa27.17■■□□□ 1.94
SNF8-216ENST00000573795 CCDC84Q86UT8 332 aaPredicted RBP27.17■■□□□ 1.94
SNF8-216ENST00000573795 SPATA5Q8NB90 893 aa27.17■■□□□ 1.94
SNF8-216ENST00000573795 ATAD5Q96QE3 1844 aa27.17■■□□□ 1.94
SNF8-216ENST00000573795 CTNND1O60716 968 aaKnown RBP27.16■■□□□ 1.94
SNF8-216ENST00000573795 NPM3O75607 178 aaKnown RBP27.16■■□□□ 1.94
SNF8-216ENST00000573795 GNAI2P04899 355 aa27.16■■□□□ 1.94
SNF8-216ENST00000573795 PRKCZQ05513 592 aa27.16■■□□□ 1.94
SNF8-216ENST00000573795 FASTKD5Q7L8L6 764 aaKnown RBP27.16■■□□□ 1.94
SNF8-216ENST00000573795 COL2A1P02458 1487 aaPredicted RBP27.15■■□□□ 1.94
SNF8-216ENST00000573795 FAM196BA6NMK8 535 aa27.15■■□□□ 1.94
SNF8-216ENST00000573795 HOXD10P28358 340 aa27.15■■□□□ 1.94
SNF8-216ENST00000573795 GRK4P32298 578 aa27.15■■□□□ 1.94
SNF8-216ENST00000573795 GADL1Q6ZQY3 521 aa27.15■■□□□ 1.94
SNF8-216ENST00000573795 RAET1EQ8TD07 263 aa27.15■■□□□ 1.94
SNF8-216ENST00000573795 SIPA1L1O43166 1804 aa27.15■■□□□ 1.94
SNF8-216ENST00000573795 LOC285556D6RIA3 1793 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 MAST2Q6P0Q8 1798 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 IPO8O15397 1037 aaKnown RBP27.14■■□□□ 1.94
SNF8-216ENST00000573795 TBC1D12O60347 775 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 MCAMP43121 646 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 FRAT1Q92837 279 aaPredicted RBP27.14■■□□□ 1.94
SNF8-216ENST00000573795 CLUAP1Q96AJ1 413 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 GABRQQ9UN88 632 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 SLC45A1Q9Y2W3 748 aa27.14■■□□□ 1.94
SNF8-216ENST00000573795 FCGRTP55899 365 aa27.13■■□□□ 1.93
SNF8-216ENST00000573795 TRIM75PA6NK02 468 aa27.12■■□□□ 1.93
SNF8-216ENST00000573795 CDK5RAP2Q96SN8 1893 aa27.12■■□□□ 1.93
SNF8-216ENST00000573795 MYO5AQ9Y4I1 1855 aaKnown RBP27.11■■□□□ 1.93
SNF8-216ENST00000573795 GORABQ5T7V8 394 aa27.11■■□□□ 1.93
SNF8-216ENST00000573795 OSBPL5Q9H0X9 879 aaPredicted RBP27.11■■□□□ 1.93
SNF8-216ENST00000573795 MAP4K4O95819 1239 aaPredicted RBP27.1■■□□□ 1.93
SNF8-216ENST00000573795 CCL5P13501 91 aa27.1■■□□□ 1.93
SNF8-216ENST00000573795 GSTO1P78417 241 aa27.1■■□□□ 1.93
SNF8-216ENST00000573795 G3BP1Q13283 466 aaKnown RBP eCLIP27.1■■□□□ 1.93
SNF8-216ENST00000573795 RRP1BQ14684 758 aaKnown RBP27.1■■□□□ 1.93
SNF8-216ENST00000573795 TMEM57Q8N5G2 664 aa27.1■■□□□ 1.93
SNF8-216ENST00000573795 RAI14Q9P0K7 980 aa27.1■■□□□ 1.93
SNF8-216ENST00000573795 DOCK3Q8IZD9 2030 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 LDHCP07864 332 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 POLA2Q14181 598 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 TREML2Q5T2D2 321 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 UBE2Q1Q7Z7E8 422 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.09■■□□□ 1.93
SNF8-216ENST00000573795 AGTPBP1Q9UPW5 1226 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 FOCADQ5VW36 1801 aa27.09■■□□□ 1.93
SNF8-216ENST00000573795 GJB1P08034 283 aa27.08■■□□□ 1.93
SNF8-216ENST00000573795 GJA8P48165 433 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms