RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 SLC9C1Q4G0N8 1177 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 PRRT2Q7Z6L0 340 aaPredicted RBP13.68□□□□□ -0.22
ABR-220ENST00000573325 PRO3102Q9H379 93 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.68□□□□□ -0.22
ABR-220ENST00000573325 DENND2AQ9ULE3 1009 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 PHIPQ8WWQ0 1821 aa13.68□□□□□ -0.22
ABR-220ENST00000573325 A0A1B0GUL7 405 aa13.67□□□□□ -0.22
ABR-220ENST00000573325 CYP2C8P10632 490 aa13.67□□□□□ -0.22
ABR-220ENST00000573325 TFCP2Q12800 502 aa13.67□□□□□ -0.22
ABR-220ENST00000573325 SCYL3Q8IZE3 742 aa13.67□□□□□ -0.22
ABR-220ENST00000573325 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
ABR-220ENST00000573325 HMG20BQ9P0W2 317 aa13.67□□□□□ -0.22
ABR-220ENST00000573325 COL6A3P12111 3177 aa13.67□□□□□ -0.22
ABR-220ENST00000573325 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 PNMA6EA0A0J9YXQ4 647 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 TRIM27P14373 513 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 PSMC4P43686 418 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 PRMT2P55345 433 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 MECOMQ03112 1051 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 XAGE2Q96GT9 111 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 PTPRFP10586 1907 aa13.66□□□□□ -0.22
ABR-220ENST00000573325 TBC1D12O60347 775 aa13.65□□□□□ -0.22
ABR-220ENST00000573325 JAG1P78504 1218 aa13.65□□□□□ -0.22
ABR-220ENST00000573325 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
ABR-220ENST00000573325 NSUN4Q96CB9 384 aaKnown RBP13.65□□□□□ -0.22
ABR-220ENST00000573325 GABRQQ9UN88 632 aa13.65□□□□□ -0.22
ABR-220ENST00000573325 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.22
ABR-220ENST00000573325 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
ABR-220ENST00000573325 MYH2Q9UKX2 1941 aa13.64□□□□□ -0.23
ABR-220ENST00000573325 COL2A1P02458 1487 aaPredicted RBP13.64□□□□□ -0.23
ABR-220ENST00000573325 ARID4AP29374 1257 aaPredicted RBP13.64□□□□□ -0.23
ABR-220ENST00000573325 BTDP43251 543 aa13.64□□□□□ -0.23
ABR-220ENST00000573325 PRKCZQ05513 592 aa13.64□□□□□ -0.23
ABR-220ENST00000573325 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
ABR-220ENST00000573325 GNL3LQ9NVN8 582 aaKnown RBP13.64□□□□□ -0.23
ABR-220ENST00000573325 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
ABR-220ENST00000573325 ZHX2Q9Y6X8 837 aa13.64□□□□□ -0.23
ABR-220ENST00000573325 H0YGN5 161 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 CTNND1O60716 968 aaKnown RBP13.63□□□□□ -0.23
ABR-220ENST00000573325 BCAR3O75815 825 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 MCAMP43121 646 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 GJA8P48165 433 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 POLA2Q14181 598 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 ARHGEF6Q15052 776 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 NBPF11Q86T75 865 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
ABR-220ENST00000573325 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
ABR-220ENST00000573325 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
ABR-220ENST00000573325 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
ABR-220ENST00000573325 GJB1P08034 283 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 GRK4P32298 578 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
ABR-220ENST00000573325 GNAI3P08754 354 aa13.61□□□□□ -0.23
ABR-220ENST00000573325 CCL5P13501 91 aa13.61□□□□□ -0.23
ABR-220ENST00000573325 TREML2Q5T2D2 321 aa13.61□□□□□ -0.23
ABR-220ENST00000573325 ADGRA1Q86SQ6 560 aa13.61□□□□□ -0.23
ABR-220ENST00000573325 ZGPATQ8N5A5 531 aaKnown RBP13.61□□□□□ -0.23
ABR-220ENST00000573325 PARK7Q99497 189 aaKnown RBP13.61□□□□□ -0.23
ABR-220ENST00000573325 DNAH12Q6ZR08 3092 aa13.61□□□□□ -0.23
ABR-220ENST00000573325 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
ABR-220ENST00000573325 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
ABR-220ENST00000573325 IRF5Q13568 498 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
ABR-220ENST00000573325 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
ABR-220ENST00000573325 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 SPATA5Q8NB90 893 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 UNC93B1Q9H1C4 597 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 GJD2Q9UKL4 321 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 AGTPBP1Q9UPW5 1226 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 MYPNQ86TC9 1320 aa13.6□□□□□ -0.23
ABR-220ENST00000573325 DOCK1Q14185 1865 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
ABR-220ENST00000573325 FLT3LGP49771 235 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 PPP4CP60510 307 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 KIF22Q14807 665 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
ABR-220ENST00000573325 SSH3Q8TE77 659 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 OSBPL5Q9H0X9 879 aaPredicted RBP13.59□□□□□ -0.23
ABR-220ENST00000573325 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
ABR-220ENST00000573325 AKAP2Q9Y2D5 859 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 MGAMO43451 1857 aa13.59□□□□□ -0.23
ABR-220ENST00000573325 LOC285556D6RIA3 1793 aa13.58□□□□□ -0.23
ABR-220ENST00000573325 TRIM75PA6NK02 468 aa13.58□□□□□ -0.24
ABR-220ENST00000573325 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
ABR-220ENST00000573325 RLBP1P12271 317 aa13.58□□□□□ -0.24
ABR-220ENST00000573325 CAP2P40123 477 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms