RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
LINC01996-201ENST00000573270 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
LINC01996-201ENST00000573270 SAP30BPQ9UHR5 308 aaKnown RBP16.17■□□□□ 0.18
LINC01996-201ENST00000573270 POLR2AP24928 1970 aaKnown RBP16.17■□□□□ 0.18
LINC01996-201ENST00000573270 RPAP1Q9BWH6 1393 aaPredicted RBP16.16■□□□□ 0.18
LINC01996-201ENST00000573270 PAPPA2Q9BXP8 1791 aa16.16■□□□□ 0.18
LINC01996-201ENST00000573270 GSG1L2A8MUP6 293 aa16.16■□□□□ 0.18
LINC01996-201ENST00000573270 SEC24BO95487 1268 aa16.16■□□□□ 0.18
LINC01996-201ENST00000573270 APPP05067 770 aa16.16■□□□□ 0.18
LINC01996-201ENST00000573270 TDO2P48775 406 aa16.16■□□□□ 0.18
LINC01996-201ENST00000573270 OSBPL5Q9H0X9 879 aaPredicted RBP16.16■□□□□ 0.18
LINC01996-201ENST00000573270 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
LINC01996-201ENST00000573270 SSC5DA1L4H1 1573 aa16.16■□□□□ 0.18
LINC01996-201ENST00000573270 VEGFAP15692 232 aaPredicted RBP16.15■□□□□ 0.18
LINC01996-201ENST00000573270 EVX2Q03828 476 aa16.15■□□□□ 0.18
LINC01996-201ENST00000573270 TCP10Q12799 353 aa16.15■□□□□ 0.18
LINC01996-201ENST00000573270 APOBEC3FQ8IUX4 373 aaKnown RBP16.15■□□□□ 0.18
LINC01996-201ENST00000573270 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
LINC01996-201ENST00000573270 IDI2Q9BXS1 227 aa16.15■□□□□ 0.18
LINC01996-201ENST00000573270 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
LINC01996-201ENST00000573270 PITPNM2Q9BZ72 1349 aa16.15■□□□□ 0.18
LINC01996-201ENST00000573270 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 REC8O95072 547 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 CYP2D6P10635 497 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 ZFPM1Q8IX07 1006 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 IFNL3Q8IZI9 196 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 NAPBQ9H115 298 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 MKRN1Q9UHC7 482 aaKnown RBP16.14■□□□□ 0.17
LINC01996-201ENST00000573270 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
LINC01996-201ENST00000573270 ATAD5Q96QE3 1844 aa16.14■□□□□ 0.17
LINC01996-201ENST00000573270 CYP2D7A0A087X1C5 515 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
LINC01996-201ENST00000573270 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
LINC01996-201ENST00000573270 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 TMEM39BQ9GZU3 492 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
LINC01996-201ENST00000573270 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
LINC01996-201ENST00000573270 ATRNL1Q5VV63 1379 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
LINC01996-201ENST00000573270 SMIM22K7EJ46 135 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 ENTPD3O75355 529 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 TNNI2P48788 182 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 TNFAIP1Q13829 316 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 FKBP1CQ5VVH2 108 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 SH3BP5LQ7L8J4 393 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 FAM151AQ8WW52 585 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
LINC01996-201ENST00000573270 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
LINC01996-201ENST00000573270 DDTLA6NHG4 134 aaPredicted RBP16.11■□□□□ 0.17
LINC01996-201ENST00000573270 HAND2P61296 217 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 RASA3Q14644 834 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 GIMAP6Q6P9H5 292 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 FAM83AQ86UY5 434 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
LINC01996-201ENST00000573270 MAP4K1Q92918 833 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
LINC01996-201ENST00000573270 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
LINC01996-201ENST00000573270 TRPM7Q96QT4 1865 aa16.1■□□□□ 0.17
LINC01996-201ENST00000573270 USP17L12C9JPN9 530 aa16.1■□□□□ 0.17
LINC01996-201ENST00000573270 USP17L21D6R901 530 aa16.1■□□□□ 0.17
LINC01996-201ENST00000573270 NPM3O75607 178 aaKnown RBP16.1■□□□□ 0.17
LINC01996-201ENST00000573270 FGAP02671 866 aa16.1■□□□□ 0.17
LINC01996-201ENST00000573270 ALX1Q15699 326 aa16.1■□□□□ 0.17
LINC01996-201ENST00000573270 MAP1SQ66K74 1059 aaPredicted RBP16.1■□□□□ 0.17
LINC01996-201ENST00000573270 ZC3H15Q8WU90 426 aaKnown RBP16.1■□□□□ 0.17
LINC01996-201ENST00000573270 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
LINC01996-201ENST00000573270 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
LINC01996-201ENST00000573270 HLA-DOAP06340 250 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 PPARAQ07869 468 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 DLK2Q6UY11 383 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 TBC1D10CQ8IV04 446 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 AMOTL1Q8IY63 956 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 TEPSINQ96N21 525 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 CSRNP1Q96S65 589 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 GLIS2Q9BZE0 524 aaPredicted RBP16.09■□□□□ 0.17
LINC01996-201ENST00000573270 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
LINC01996-201ENST00000573270 GREB1LQ9C091 1923 aaPredicted RBP16.09■□□□□ 0.17
LINC01996-201ENST00000573270 FAM196BA6NMK8 535 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 KIF3CO14782 793 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 SLURP2P0DP57 97 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 PLCD1P51178 756 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 CTDSPL2Q05D32 466 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 SBK1Q52WX2 424 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 PRAMEF18Q5VWM3 479 aa16.08■□□□□ 0.16
LINC01996-201ENST00000573270 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms