RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 PRKCZQ05513 592 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 SH3BP5LQ7L8J4 393 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 ZSCAN29Q8IWY8 852 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 PA2G4Q9UQ80 394 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 AFG3L2Q9Y4W6 797 aa12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 PDS5AQ29RF7 1337 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-205ENST00000572656 KIAA0100Q14667 2235 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 CTNND1O60716 968 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 SPTY2D1Q68D10 685 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 UBE2Q1Q7Z7E8 422 aa12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 DZIP1Q86YF9 867 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 DPF3Q92784 378 aa12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 RNF208Q9H0X6 261 aa12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 RFX7Q2KHR2 1363 aa12.25□□□□□ -0.45
TRAPPC1-205ENST00000572656 DDTLA6NHG4 134 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-205ENST00000572656 TIMM10P62072 90 aa12.24□□□□□ -0.45
TRAPPC1-205ENST00000572656 RASGRF1Q13972 1273 aa12.24□□□□□ -0.45
TRAPPC1-205ENST00000572656 GADL1Q6ZQY3 521 aa12.24□□□□□ -0.45
TRAPPC1-205ENST00000572656 GABRQQ9UN88 632 aa12.24□□□□□ -0.45
TRAPPC1-205ENST00000572656 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
TRAPPC1-205ENST00000572656 MROH7-TTC4A0A0A0MT08 1334 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 ADCY3O60266 1144 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 BTDP43251 543 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 PICALMQ13492 652 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 XAGE2Q96GT9 111 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 MEIS3Q99687 375 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 HTATIP2Q9BUP3 242 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 DDX4Q9NQI0 724 aaKnown RBP12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 ZSWIM8A7E2V4 1837 aa12.23□□□□□ -0.45
TRAPPC1-205ENST00000572656 GPR75-ASB3A0A0A6YYF3 556 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 A0A1B0GUL7 405 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 TRIM75PA6NK02 468 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 TBC1D12O60347 775 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 SGPL1O95470 568 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 CAPN2P17655 700 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 FLT3LGP49771 235 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 MECOMQ03112 1051 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 TFCP2Q12800 502 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 MVPQ14764 893 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 SMCR8Q8TEV9 937 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
TRAPPC1-205ENST00000572656 TNPO2O14787 897 aaKnown RBP12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 SRGAP3O43295 1099 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 FARP2O94887 1054 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 MAP4K4O95819 1239 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 GNAI3P08754 354 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 RHBDL3P58872 404 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 MTX1Q13505 466 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 IRF5Q13568 498 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 ARHGAP45Q92619 1136 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 NR2E3Q9Y5X4 410 aa12.21□□□□□ -0.45
TRAPPC1-205ENST00000572656 INHAP05111 366 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 LDHCP07864 332 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 ELNP15502 786 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 GSTO1P78417 241 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 ZNF384Q8TF68 577 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 COA7Q96BR5 231 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 NEUROD6Q96NK8 337 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 HMG20BQ9P0W2 317 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
TRAPPC1-205ENST00000572656 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 TFRCP02786 760 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 FAM110CQ1W6H9 321 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 CCDC84Q86UT8 332 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 ANKRD13CQ8N6S4 541 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 NSUN4Q96CB9 384 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 DEFB118Q96PH6 123 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 PRO3102Q9H379 93 aa12.19□□□□□ -0.46
TRAPPC1-205ENST00000572656 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
TRAPPC1-205ENST00000572656 SPP2Q13103 211 aa12.18□□□□□ -0.46
TRAPPC1-205ENST00000572656 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms