RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
CHMP6-203ENST00000572525 GRM8O00222 908 aa12.81□□□□□ -0.36
CHMP6-203ENST00000572525 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
CHMP6-203ENST00000572525 BEND3Q5T5X7 828 aa12.81□□□□□ -0.36
CHMP6-203ENST00000572525 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
CHMP6-203ENST00000572525 ZNF594Q96JF6 807 aaPredicted RBP12.81□□□□□ -0.36
CHMP6-203ENST00000572525 OGDHLQ9ULD0 1010 aa12.81□□□□□ -0.36
CHMP6-203ENST00000572525 IL16Q14005 1332 aa12.81□□□□□ -0.36
CHMP6-203ENST00000572525 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
CHMP6-203ENST00000572525 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
CHMP6-203ENST00000572525 EPHA10Q5JZY3 1008 aa12.8□□□□□ -0.36
CHMP6-203ENST00000572525 SCYL3Q8IZE3 742 aa12.8□□□□□ -0.36
CHMP6-203ENST00000572525 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
CHMP6-203ENST00000572525 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
CHMP6-203ENST00000572525 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
CHMP6-203ENST00000572525 FRAT2O75474 233 aaPredicted RBP12.79□□□□□ -0.36
CHMP6-203ENST00000572525 VGLL2Q8N8G2 317 aa12.79□□□□□ -0.36
CHMP6-203ENST00000572525 SMCR8Q8TEV9 937 aaPredicted RBP12.79□□□□□ -0.36
CHMP6-203ENST00000572525 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
CHMP6-203ENST00000572525 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
CHMP6-203ENST00000572525 HMX1Q9NP08 348 aaPredicted RBP12.79□□□□□ -0.36
CHMP6-203ENST00000572525 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
CHMP6-203ENST00000572525 PRDM6Q9NQX0 595 aa12.79□□□□□ -0.36
CHMP6-203ENST00000572525 PNMA3Q9UL41 463 aa12.79□□□□□ -0.36
CHMP6-203ENST00000572525 AFG3L2Q9Y4W6 797 aa12.79□□□□□ -0.36
CHMP6-203ENST00000572525 BDP1A6H8Y1 2624 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 PHF20L1A8MW92 1017 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 ZBTB22O15209 634 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 ALDH1L1O75891 902 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 PTPRAP18433 802 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 GCLCP48506 637 aaPredicted RBP12.78□□□□□ -0.36
CHMP6-203ENST00000572525 CHAF1AQ13111 956 aaPredicted RBP12.78□□□□□ -0.36
CHMP6-203ENST00000572525 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 AGTPBP1Q9UPW5 1226 aa12.78□□□□□ -0.36
CHMP6-203ENST00000572525 PDE8BO95263 885 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 MAP3K21Q5TCX8 1036 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 PROCA1Q8NCQ7 364 aaPredicted RBP12.77□□□□□ -0.37
CHMP6-203ENST00000572525 GUCD1Q96NT3 240 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 CDH23Q9H251 3354 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 RFX7Q2KHR2 1363 aa12.77□□□□□ -0.37
CHMP6-203ENST00000572525 RLFQ13129 1914 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 CTNND1O60716 968 aaKnown RBP12.76□□□□□ -0.37
CHMP6-203ENST00000572525 ENTPD3O75355 529 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 COL6A1P12109 1028 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
CHMP6-203ENST00000572525 GADL1Q6ZQY3 521 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 TBC1D2Q9BYX2 928 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
CHMP6-203ENST00000572525 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
CHMP6-203ENST00000572525 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
CHMP6-203ENST00000572525 UTYO14607 1347 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 PFASO15067 1338 aa12.76□□□□□ -0.37
CHMP6-203ENST00000572525 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
CHMP6-203ENST00000572525 SYN1P17600 705 aa12.75□□□□□ -0.37
CHMP6-203ENST00000572525 NFIAQ12857 509 aa12.75□□□□□ -0.37
CHMP6-203ENST00000572525 TRMT44Q8IYL2 757 aaKnown RBP12.75□□□□□ -0.37
CHMP6-203ENST00000572525 SALL1Q9NSC2 1324 aa12.75□□□□□ -0.37
CHMP6-203ENST00000572525 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
CHMP6-203ENST00000572525 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
CHMP6-203ENST00000572525 FGFR2P21802 821 aa12.74□□□□□ -0.37
CHMP6-203ENST00000572525 TCP10Q12799 353 aa12.74□□□□□ -0.37
CHMP6-203ENST00000572525 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHMP6-203ENST00000572525 METTL24Q5JXM2 366 aa12.74□□□□□ -0.37
CHMP6-203ENST00000572525 ANKRD13CQ8N6S4 541 aa12.74□□□□□ -0.37
CHMP6-203ENST00000572525 SYMPKQ92797 1274 aaKnown RBP12.74□□□□□ -0.37
CHMP6-203ENST00000572525 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
CHMP6-203ENST00000572525 MYO9BQ13459 2157 aa12.74□□□□□ -0.37
CHMP6-203ENST00000572525 VAMP4O75379 141 aa12.73□□□□□ -0.37
CHMP6-203ENST00000572525 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
CHMP6-203ENST00000572525 ZNF697Q5TEC3 545 aa12.73□□□□□ -0.37
CHMP6-203ENST00000572525 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
CHMP6-203ENST00000572525 MORF4L1Q9UBU8 362 aa12.73□□□□□ -0.37
CHMP6-203ENST00000572525 GAKO14976 1311 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 F6X3S4 739 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 TBC1D12O60347 775 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
CHMP6-203ENST00000572525 SOCS4Q8WXH5 440 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
CHMP6-203ENST00000572525 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
CHMP6-203ENST00000572525 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
CHMP6-203ENST00000572525 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
CHMP6-203ENST00000572525 LRRC24Q50LG9 513 aa12.71□□□□□ -0.37
CHMP6-203ENST00000572525 TRIB2Q92519 343 aa12.71□□□□□ -0.37
CHMP6-203ENST00000572525 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
CHMP6-203ENST00000572525 CDK5RAP2Q96SN8 1893 aa12.71□□□□□ -0.37
CHMP6-203ENST00000572525 FOCADQ5VW36 1801 aa12.71□□□□□ -0.38
CHMP6-203ENST00000572525 TRIM75PA6NK02 468 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 SEMA3EO15041 775 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
CHMP6-203ENST00000572525 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
CHMP6-203ENST00000572525 PRDX5P30044 214 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 RGS3P49796 1198 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms