RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 CHD4Q14839 1912 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 SNED1Q8TER0 1413 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 GOLGA8BA8MQT2 603 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 BTDP43251 543 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 TMEM67Q5HYA8 995 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 STK11IPQ8N1F8 1099 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 NSUN7Q8NE18 718 aaKnown RBP24.15■■□□□ 1.46
CHRNE-202ENST00000572438 HPS5Q9UPZ3 1129 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 GAKO14976 1311 aa24.15■■□□□ 1.46
CHRNE-202ENST00000572438 CTDNEP1O95476 244 aa24.14■■□□□ 1.46
CHRNE-202ENST00000572438 FGRP09769 529 aa24.14■■□□□ 1.46
CHRNE-202ENST00000572438 USP5P45974 858 aa24.14■■□□□ 1.46
CHRNE-202ENST00000572438 R3HDM1Q15032 1099 aaKnown RBP24.14■■□□□ 1.46
CHRNE-202ENST00000572438 MCTP1Q6DN14 999 aa24.14■■□□□ 1.46
CHRNE-202ENST00000572438 TTLL6Q8N841 843 aa24.14■■□□□ 1.46
CHRNE-202ENST00000572438 NCOA5Q9HCD5 579 aaKnown RBP24.14■■□□□ 1.46
CHRNE-202ENST00000572438 MKRN1Q9UHC7 482 aaKnown RBP24.14■■□□□ 1.46
CHRNE-202ENST00000572438 SMIM22K7EJ46 135 aa24.14■■□□□ 1.45
CHRNE-202ENST00000572438 IFIT3O14879 490 aaKnown RBP24.14■■□□□ 1.45
CHRNE-202ENST00000572438 LIFRP42702 1097 aa24.14■■□□□ 1.45
CHRNE-202ENST00000572438 ESR2Q92731 530 aa24.14■■□□□ 1.45
CHRNE-202ENST00000572438 LY9Q9HBG7 655 aa24.14■■□□□ 1.45
CHRNE-202ENST00000572438 DLEC1Q9Y238 1755 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 PLCG2P16885 1265 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 HMGN5P82970 282 aaKnown RBP24.13■■□□□ 1.45
CHRNE-202ENST00000572438 SART3Q15020 963 aaKnown RBP24.13■■□□□ 1.45
CHRNE-202ENST00000572438 GRIPAP1Q4V328 841 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 SGMS1Q86VZ5 419 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 CERS5Q8N5B7 392 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 SUPT20HQ8NEM7 779 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 DBNDD1Q9H9R9 158 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 MCM9Q9NXL9 1143 aa24.13■■□□□ 1.45
CHRNE-202ENST00000572438 PTPDC1A2A3K4 754 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 PSDA5PKW4 1024 aaPredicted RBP24.12■■□□□ 1.45
CHRNE-202ENST00000572438 DHX16O60231 1041 aaKnown RBP24.12■■□□□ 1.45
CHRNE-202ENST00000572438 ZBTB7AO95365 584 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 F13A1P00488 732 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 BAZ2AQ9UIF9 1905 aaKnown RBP24.12■■□□□ 1.45
CHRNE-202ENST00000572438 MYH2Q9UKX2 1941 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 C21orf2O43822 256 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 TRAK2O60296 914 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 SLC3A2P08195 630 aaKnown RBP24.12■■□□□ 1.45
CHRNE-202ENST00000572438 DPEP1P16444 411 aa24.12■■□□□ 1.45
CHRNE-202ENST00000572438 VPS37CA5D8V6 355 aaPredicted RBP24.11■■□□□ 1.45
CHRNE-202ENST00000572438 KCNA3P22001 575 aa24.11■■□□□ 1.45
CHRNE-202ENST00000572438 NFXL1Q6ZNB6 911 aa24.11■■□□□ 1.45
CHRNE-202ENST00000572438 DDX11Q96FC9 970 aa24.11■■□□□ 1.45
CHRNE-202ENST00000572438 SENP2Q9HC62 589 aa24.11■■□□□ 1.45
CHRNE-202ENST00000572438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.11■■□□□ 1.45
CHRNE-202ENST00000572438 ORC4O43929 436 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 ECE2O60344 883 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 CYP2D6P10635 497 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 KIAA2012Q0VF49 1180 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 APOA5Q6Q788 366 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 FAM184AQ8NB25 1140 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 TGFBRAP1Q8WUH2 860 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 MTFR1LQ9H019 292 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 KIF3AQ9Y496 699 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 DAGLAQ9Y4D2 1042 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 ATP6V1DQ9Y5K8 247 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 ERICH2A1L162 156 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 USP17L8P0C7I0 530 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 TEX11Q8IYF3 940 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 CHAMP1Q96JM3 812 aa24.1■■□□□ 1.45
CHRNE-202ENST00000572438 TTF2Q9UNY4 1162 aaKnown RBP24.1■■□□□ 1.45
CHRNE-202ENST00000572438 LAMB1P07942 1786 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 POLD1P28340 1107 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 RHBDL3P58872 404 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 EVX2Q03828 476 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 WTAPQ15007 396 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 SKOR2Q2VWA4 1001 aaPredicted RBP24.09■■□□□ 1.45
CHRNE-202ENST00000572438 CCDC93Q567U6 631 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 C12orf60Q5U649 245 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 ZKSCAN3Q9BRR0 538 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 UBAC1Q9BSL1 405 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 MXD3Q9BW11 206 aa24.09■■□□□ 1.45
CHRNE-202ENST00000572438 CCDC69A6NI79 296 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 F8W031 263 aaPredicted RBP24.08■■□□□ 1.45
CHRNE-202ENST00000572438 PRDM1O75626 825 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 METAP2P50579 478 aaKnown RBP eCLIP24.08■■□□□ 1.45
CHRNE-202ENST00000572438 FKBP1AP62942 108 aaKnown RBP24.08■■□□□ 1.45
CHRNE-202ENST00000572438 AOC3Q16853 763 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 STRIP1Q5VSL9 837 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 RAB11FIP4Q86YS3 637 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 AMOTL1Q8IY63 956 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 TMTC2Q8N394 836 aa24.08■■□□□ 1.45
CHRNE-202ENST00000572438 ATF5Q9Y2D1 282 aaPredicted RBP24.08■■□□□ 1.45
CHRNE-202ENST00000572438 KIF13BQ9NQT8 1826 aa24.08■■□□□ 1.44
CHRNE-202ENST00000572438 ZBTB43O43298 467 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 PDE4BQ07343 736 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 CDC37L1Q7L3B6 337 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 MAPKAPK5Q8IW41 473 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 KCNQ5Q9NR82 932 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 LMBRD1Q9NUN5 540 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 SLC12A7Q9Y666 1083 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 CPLX1O14810 134 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 RANBP6O60518 1105 aaKnown RBP24.07■■□□□ 1.44
CHRNE-202ENST00000572438 ROBO3Q96MS0 1386 aa24.07■■□□□ 1.44
CHRNE-202ENST00000572438 TGFB2P61812 414 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms