RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 TRAPPC3LQ5T215 181 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 CTR9Q6PD62 1173 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 VPS37AQ8NEZ2 397 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 PIF1Q9H611 641 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 NTSR2O95665 410 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 RFX5P48382 616 aaPredicted RBP10.36□□□□□ -0.75
TVP23A-205ENST00000572428 PPP1R42Q7Z4L9 355 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 MYO1HQ8N1T3 1032 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 BICC1Q9H694 974 aaKnown RBP10.36□□□□□ -0.75
TVP23A-205ENST00000572428 CD248Q9HCU0 757 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 TMOD4Q9NZQ9 345 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 KIF13BQ9NQT8 1826 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 CCP110O43303 1012 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 ENPP1P22413 925 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 EPHA10Q5JZY3 1008 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 TRIML1Q8N9V2 468 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 TDRD7Q8NHU6 1098 aaKnown RBP10.36□□□□□ -0.75
TVP23A-205ENST00000572428 UTP6Q9NYH9 597 aaKnown RBP10.36□□□□□ -0.75
TVP23A-205ENST00000572428 SHTN1A0MZ66 631 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 MYBL2P10244 700 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 IL4RP24394 825 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 SCNN1AP37088 669 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 TRERF1Q96PN7 1200 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 PANK2Q9BZ23 570 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 ETAA1Q9NY74 926 aa10.36□□□□□ -0.75
TVP23A-205ENST00000572428 NEFHP12036 1026 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 USP5P45974 858 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 PPP2R5BQ15173 497 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 ZNF827Q17R98 1081 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 SLC10A5Q5PT55 438 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 ARHGAP27Q6ZUM4 889 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 FLAD1Q8NFF5 587 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 CDC5LQ99459 802 aaKnown RBP10.35□□□□□ -0.75
TVP23A-205ENST00000572428 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
TVP23A-205ENST00000572428 DLEC1Q9Y238 1755 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 HOXA2O43364 376 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 SMARCA1P28370 1054 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 TBX4P57082 545 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 TSGA10IPQ3SY00 556 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 SUSD4Q5VX71 490 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 UBXN4Q92575 508 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
TVP23A-205ENST00000572428 hCG_2014768A0A024R1R8 64 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 GSCP56915 257 aaPredicted RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 RASSF7Q02833 373 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 USPL1Q5W0Q7 1092 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 MYLK4Q86YV6 388 aaPredicted RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 AK9Q5TCS8 1911 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 LRRC37AA6NMS7 1700 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 EIF3JO75822 258 aaKnown RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 NFXL1Q6ZNB6 911 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 TBC1D22AQ8WUA7 517 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 TBC1D7Q9P0N9 293 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 ZPR1O75312 459 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 TM4SF1P30408 202 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 TBC1D9BQ66K14 1250 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 PLEKHM2Q8IWE5 1019 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 MMTAG2Q9BU76 263 aaKnown RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 UTP14AQ9BVJ6 771 aaKnown RBP10.34□□□□□ -0.75
TVP23A-205ENST00000572428 USP25Q9UHP3 1055 aa10.34□□□□□ -0.75
TVP23A-205ENST00000572428 SRGAP3O43295 1099 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 LDHCP07864 332 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 CCDC175P0C221 793 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 MYCLP1P12525 358 aaPredicted RBP10.33□□□□□ -0.76
TVP23A-205ENST00000572428 GYS1P13807 737 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 C10orf62Q5T681 223 aaPredicted RBP10.33□□□□□ -0.76
TVP23A-205ENST00000572428 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 C17orf50Q8WW18 174 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 SALL3Q9BXA9 1300 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 CARMIL3Q8ND23 1372 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 KIF5CO60282 957 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 PDE8AO60658 829 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 HIP1RO75146 1068 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 CDC45O75419 566 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 RFC4P35249 363 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 ZNF132P52740 706 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 EZH2Q15910 746 aaKnown RBP10.33□□□□□ -0.76
TVP23A-205ENST00000572428 LMBRD2Q68DH5 695 aaPredicted RBP10.33□□□□□ -0.76
TVP23A-205ENST00000572428 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
TVP23A-205ENST00000572428 NIP7Q9Y221 180 aaKnown RBP eCLIP10.33□□□□□ -0.76
TVP23A-205ENST00000572428 PNPLA7Q6ZV29 1317 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 SH3TC1Q8TE82 1336 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 TAF1P21675 1872 aa10.33□□□□□ -0.76
TVP23A-205ENST00000572428 TPPPO94811 219 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 STIP1P31948 543 aaKnown RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 SART3Q15020 963 aaKnown RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 TBC1D25Q3MII6 688 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 TTC39BQ5VTQ0 682 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 TAX1BP1Q86VP1 789 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 RAVER1Q8IY67 606 aaKnown RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 LSM14AQ8ND56 463 aaKnown RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 SCYL1Q96KG9 808 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 NYXQ9GZU5 481 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms