RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 IL15P40933 162 aaPredicted RBP23.62■■□□□ 1.37
SCARF1-204ENST00000570902 RGS3P49796 1198 aa23.62■■□□□ 1.37
SCARF1-204ENST00000570902 UBE2Q1Q7Z7E8 422 aa23.62■■□□□ 1.37
SCARF1-204ENST00000570902 SLF2Q8IX21 1173 aa23.62■■□□□ 1.37
SCARF1-204ENST00000570902 SLC45A1Q9Y2W3 748 aa23.62■■□□□ 1.37
SCARF1-204ENST00000570902 LRRFIP2Q9Y608 721 aaKnown RBP23.62■■□□□ 1.37
SCARF1-204ENST00000570902 CEP290O15078 2479 aa23.62■■□□□ 1.37
SCARF1-204ENST00000570902 DOCK2Q92608 1830 aa23.61■■□□□ 1.37
SCARF1-204ENST00000570902 PTPRAP18433 802 aa23.61■■□□□ 1.37
SCARF1-204ENST00000570902 PHKA1P46020 1223 aa23.61■■□□□ 1.37
SCARF1-204ENST00000570902 ZSCAN29Q8IWY8 852 aaPredicted RBP23.61■■□□□ 1.37
SCARF1-204ENST00000570902 GAKO14976 1311 aa23.6■■□□□ 1.37
SCARF1-204ENST00000570902 CAPN2P17655 700 aa23.6■■□□□ 1.37
SCARF1-204ENST00000570902 DZIP1Q86YF9 867 aaKnown RBP23.6■■□□□ 1.37
SCARF1-204ENST00000570902 U2AF1L4Q8WU68 220 aaKnown RBP23.6■■□□□ 1.37
SCARF1-204ENST00000570902 SMC4Q9NTJ3 1288 aa23.6■■□□□ 1.37
SCARF1-204ENST00000570902 AFG3L2Q9Y4W6 797 aa23.6■■□□□ 1.37
SCARF1-204ENST00000570902 NR2E3Q9Y5X4 410 aa23.6■■□□□ 1.37
SCARF1-204ENST00000570902 MAP3K10Q02779 954 aa23.59■■□□□ 1.37
SCARF1-204ENST00000570902 GADL1Q6ZQY3 521 aa23.59■■□□□ 1.37
SCARF1-204ENST00000570902 RBM27Q9P2N5 1060 aaKnown RBP23.59■■□□□ 1.37
SCARF1-204ENST00000570902 GABRQQ9UN88 632 aa23.59■■□□□ 1.37
SCARF1-204ENST00000570902 MGAMO43451 1857 aa23.59■■□□□ 1.37
SCARF1-204ENST00000570902 PDS5AQ29RF7 1337 aaKnown RBP23.59■■□□□ 1.37
SCARF1-204ENST00000570902 RFX7Q2KHR2 1363 aa23.58■■□□□ 1.37
SCARF1-204ENST00000570902 ADCY3O60266 1144 aa23.58■■□□□ 1.37
SCARF1-204ENST00000570902 CTNND1O60716 968 aaKnown RBP23.58■■□□□ 1.37
SCARF1-204ENST00000570902 FARP2O94887 1054 aaPredicted RBP23.58■■□□□ 1.37
SCARF1-204ENST00000570902 SLFN5Q08AF3 891 aa23.58■■□□□ 1.37
SCARF1-204ENST00000570902 CCDC102BQ68D86 513 aa23.58■■□□□ 1.37
SCARF1-204ENST00000570902 SMCR8Q8TEV9 937 aaPredicted RBP23.58■■□□□ 1.37
SCARF1-204ENST00000570902 TRIOBPQ9H2D6 2365 aa23.57■■□□□ 1.36
SCARF1-204ENST00000570902 MYH2Q9UKX2 1941 aa23.57■■□□□ 1.36
SCARF1-204ENST00000570902 SGPL1O95470 568 aa23.57■■□□□ 1.36
SCARF1-204ENST00000570902 SPTY2D1Q68D10 685 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-204ENST00000570902 SH3BP5LQ7L8J4 393 aa23.57■■□□□ 1.36
SCARF1-204ENST00000570902 PXYLP1Q8TE99 480 aa23.57■■□□□ 1.36
SCARF1-204ENST00000570902 FAM163AQ96GL9 167 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-204ENST00000570902 UNC93B1Q9H1C4 597 aa23.57■■□□□ 1.36
SCARF1-204ENST00000570902 TNPO2O14787 897 aaKnown RBP23.56■■□□□ 1.36
SCARF1-204ENST00000570902 FLT3LGP49771 235 aa23.56■■□□□ 1.36
SCARF1-204ENST00000570902 IRF5Q13568 498 aa23.56■■□□□ 1.36
SCARF1-204ENST00000570902 COPRSQ9NQ92 184 aa23.56■■□□□ 1.36
SCARF1-204ENST00000570902 ABCF2Q9UG63 623 aa23.56■■□□□ 1.36
SCARF1-204ENST00000570902 DDTLA6NHG4 134 aaPredicted RBP23.55■■□□□ 1.36
SCARF1-204ENST00000570902 ADORA1P30542 326 aa23.55■■□□□ 1.36
SCARF1-204ENST00000570902 SZT2Q5T011 3432 aa23.55■■□□□ 1.36
SCARF1-204ENST00000570902 DOCK1Q14185 1865 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 TRIM75PA6NK02 468 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 INHAP05111 366 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 BTDP43251 543 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 PICALMQ13492 652 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 RASGRF1Q13972 1273 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 PNMA3Q9UL41 463 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 AGTPBP1Q9UPW5 1226 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 PA2G4Q9UQ80 394 aaKnown RBP23.54■■□□□ 1.36
SCARF1-204ENST00000570902 MROH7-TTC4A0A0A0MT08 1334 aa23.54■■□□□ 1.36
SCARF1-204ENST00000570902 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
SCARF1-204ENST00000570902 ELNP15502 786 aa23.53■■□□□ 1.36
SCARF1-204ENST00000570902 COA7Q96BR5 231 aa23.53■■□□□ 1.36
SCARF1-204ENST00000570902 API5Q9BZZ5 524 aaKnown RBP23.53■■□□□ 1.36
SCARF1-204ENST00000570902 PRO3102Q9H379 93 aa23.53■■□□□ 1.36
SCARF1-204ENST00000570902 DDX4Q9NQI0 724 aaKnown RBP23.53■■□□□ 1.36
SCARF1-204ENST00000570902 AKAP2Q9Y2D5 859 aa23.53■■□□□ 1.36
SCARF1-204ENST00000570902 TBC1D12O60347 775 aa23.52■■□□□ 1.36
SCARF1-204ENST00000570902 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
SCARF1-204ENST00000570902 CT47B1P0C2W7 299 aaPredicted RBP23.52■■□□□ 1.36
SCARF1-204ENST00000570902 RANBP2P49792 3224 aaKnown RBP23.52■■□□□ 1.35
SCARF1-204ENST00000570902 PTPRFP10586 1907 aa23.51■■□□□ 1.35
SCARF1-204ENST00000570902 NPM3O75607 178 aaKnown RBP23.51■■□□□ 1.35
SCARF1-204ENST00000570902 TIMM10P62072 90 aa23.51■■□□□ 1.35
SCARF1-204ENST00000570902 MVPQ14764 893 aaKnown RBP23.51■■□□□ 1.35
SCARF1-204ENST00000570902 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
SCARF1-204ENST00000570902 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
SCARF1-204ENST00000570902 PHIPQ8WWQ0 1821 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 GPR75-ASB3A0A0A6YYF3 556 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 A0A1W2PPC1 479 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 EVI5O60447 810 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 MAP4K4O95819 1239 aaPredicted RBP23.5■■□□□ 1.35
SCARF1-204ENST00000570902 FAM110CQ1W6H9 321 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 ANKRD13CQ8N6S4 541 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 PROCA1Q8NCQ7 364 aaPredicted RBP23.5■■□□□ 1.35
SCARF1-204ENST00000570902 DEFB118Q96PH6 123 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 TBC1D2Q9BYX2 928 aa23.5■■□□□ 1.35
SCARF1-204ENST00000570902 PAK6Q9NQU5 681 aaPredicted RBP23.5■■□□□ 1.35
SCARF1-204ENST00000570902 A0A1B0GUL7 405 aa23.49■■□□□ 1.35
SCARF1-204ENST00000570902 GSTO1P78417 241 aa23.49■■□□□ 1.35
SCARF1-204ENST00000570902 MECOMQ03112 1051 aa23.49■■□□□ 1.35
SCARF1-204ENST00000570902 XAGE2Q96GT9 111 aa23.49■■□□□ 1.35
SCARF1-204ENST00000570902 OSBPL5Q9H0X9 879 aaPredicted RBP23.49■■□□□ 1.35
SCARF1-204ENST00000570902 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.49■■□□□ 1.35
SCARF1-204ENST00000570902 TAOK2Q9UL54 1235 aa23.49■■□□□ 1.35
SCARF1-204ENST00000570902 SLURP2P0DP57 97 aa23.48■■□□□ 1.35
SCARF1-204ENST00000570902 RHBDL3P58872 404 aa23.48■■□□□ 1.35
SCARF1-204ENST00000570902 PABPC4Q13310 644 aaKnown RBP eCLIP23.48■■□□□ 1.35
SCARF1-204ENST00000570902 TREML2Q5T2D2 321 aa23.48■■□□□ 1.35
SCARF1-204ENST00000570902 CDCA7LQ96GN5 454 aa23.48■■□□□ 1.35
SCARF1-204ENST00000570902 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.48■■□□□ 1.35
SCARF1-204ENST00000570902 LDHCP07864 332 aa23.47■■□□□ 1.35
SCARF1-204ENST00000570902 GCLCP48506 637 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms