RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 JAG2Q9Y219 1238 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 PPP2R3BQ9Y5P8 575 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 SSC5DA1L4H1 1573 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 KIAA0100Q14667 2235 aaKnown RBP8.21□□□□□ -1.1
SMG6-204ENST00000570606 CLRN2A0PK11 232 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 GRM8O00222 908 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 HOXA2O43364 376 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
SMG6-204ENST00000570606 LILRB3O75022 631 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 IL1R1P14778 569 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 RBM5P52756 815 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMG6-204ENST00000570606 FOXO4P98177 505 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 PKN2Q16513 984 aaKnown RBP8.2□□□□□ -1.1
SMG6-204ENST00000570606 QPCTQ16769 361 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 BEND3Q5T5X7 828 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 SLC4A10Q6U841 1118 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 C15orf52Q6ZUT6 534 aaKnown RBP8.2□□□□□ -1.1
SMG6-204ENST00000570606 CERS5Q8N5B7 392 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 ZBED3Q96IU2 234 aaPredicted RBP8.2□□□□□ -1.1
SMG6-204ENST00000570606 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
SMG6-204ENST00000570606 FZD1Q9UP38 647 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 IRS2Q9Y4H2 1338 aa8.2□□□□□ -1.1
SMG6-204ENST00000570606 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 MANSC4A6NHS7 340 aaPredicted RBP8.19□□□□□ -1.1
SMG6-204ENST00000570606 BHMG1C9JSJ3 638 aaPredicted RBP8.19□□□□□ -1.1
SMG6-204ENST00000570606 GPR25O00155 361 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 FKTNO75072 461 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 ALDH1A1P00352 501 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 TM4SF4P48230 202 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 USP46P62068 366 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 FKBP1AP62942 108 aaKnown RBP8.19□□□□□ -1.1
SMG6-204ENST00000570606 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 EPHA10Q5JZY3 1008 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 LDHAL6AQ6ZMR3 332 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 SLC10A4Q96EP9 437 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 SRCIN1Q9C0H9 1055 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 PCDHB15Q9Y5E8 787 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
SMG6-204ENST00000570606 POTEB3A0JP26 581 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 ALDH1L1O75891 902 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 ZBTB48P10074 688 aaPredicted RBP8.18□□□□□ -1.1
SMG6-204ENST00000570606 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
SMG6-204ENST00000570606 TNFAIP1Q13829 316 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 SUPT20HL1Q3ZLR7 823 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
SMG6-204ENST00000570606 MFSD14BQ5SR56 506 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 LDLRAD1Q5T700 205 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 FBXO46Q6PJ61 603 aaPredicted RBP8.18□□□□□ -1.1
SMG6-204ENST00000570606 POTEBQ6S5H4 581 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 LAPTM4BQ86VI4 370 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 FAM9BQ8IZU0 186 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 POM121Q96HA1 1249 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 WNK4Q96J92 1243 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 CLMNQ96JQ2 1002 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 AK9Q5TCS8 1911 aa8.18□□□□□ -1.1
SMG6-204ENST00000570606 TRAK2O60296 914 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 GYG1P46976 350 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 UBE4AQ14139 1066 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 CSPP1Q1MSJ5 1256 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
SMG6-204ENST00000570606 PRPF38BQ5VTL8 546 aaKnown RBP8.17□□□□□ -1.1
SMG6-204ENST00000570606 VPS37DQ86XT2 251 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 HOMEZQ8IX15 550 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 SUCLG2Q96I99 432 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 PRMT6Q96LA8 375 aaPredicted RBP8.17□□□□□ -1.1
SMG6-204ENST00000570606 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 CFHR5Q9BXR6 569 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
SMG6-204ENST00000570606 AOX1Q06278 1338 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 FAM205AQ6ZU69 1335 aa8.17□□□□□ -1.1
SMG6-204ENST00000570606 TK2O00142 265 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 FRAT2O75474 233 aaPredicted RBP8.16□□□□□ -1.1
SMG6-204ENST00000570606 HIBADHP31937 336 aaKnown RBP8.16□□□□□ -1.1
SMG6-204ENST00000570606 HTTP42858 3142 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 INHBEP58166 350 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 CHAF1AQ13111 956 aaPredicted RBP8.16□□□□□ -1.1
SMG6-204ENST00000570606 RASA3Q14644 834 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 METTL24Q5JXM2 366 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 OTUD7BQ6GQQ9 843 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 MROH5Q6ZUA9 1318 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 RBBP6Q7Z6E9 1792 aaKnown RBP8.16□□□□□ -1.1
SMG6-204ENST00000570606 ANKRD13AQ8IZ07 590 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
SMG6-204ENST00000570606 NBPF3Q9H094 633 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 R3HDMLQ9H3Y0 253 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 SERPINA10Q9UK55 444 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 TRIM17Q9Y577 477 aa8.16□□□□□ -1.1
SMG6-204ENST00000570606 UNCXA6NJT0 531 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 TCP10L2B9ZVM9 353 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 IGF2BP3O00425 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG6-204ENST00000570606 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 CRKP46108 304 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 TNNI2P48788 182 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 SLF2Q8IX21 1173 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms