RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 DDRGK1Q96HY6 314 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 ANO2Q9NQ90 1003 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 HELLSQ9NRZ9 838 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 FER1L6Q2WGJ9 1857 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZNF541Q9H0D2 1346 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 GRXCR2A6NFK2 248 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 MBD4O95243 580 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 LMOD1P29536 600 aaPredicted RBP7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 CXCL9Q07325 125 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 DIXDC1Q155Q3 683 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 C8orf34Q49A92 452 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 MCMDC2Q4G0Z9 681 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 TPRNQ4KMQ1 711 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZMYM1Q5SVZ6 1142 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 POTEGQ6S5H5 508 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 MIGA1Q8NAN2 632 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 AGBL3Q8NEM8 1001 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 DDX12PQ92771 950 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 NSUN4Q96CB9 384 aaKnown RBP7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 FAM227BQ96M60 508 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 ESYT1Q9BSJ8 1104 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 TMOD2Q9NZR1 351 aa7.89□□□□□ -1.15
CTDNEP1-204ENST00000570484 MYH13Q9UKX3 1938 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 FZD9O00144 591 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 SGSM2O43147 1006 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 GPAA1O43292 621 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 MYO1BO43795 1136 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 APPP05067 770 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 USP17L8P0C7I0 530 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 GNAT2P19087 354 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 BTDP43251 543 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 MMP14P50281 582 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 SCNN1DP51172 638 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 AMOTL1Q8IY63 956 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 GPC2Q8N158 579 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 CERS5Q8N5B7 392 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZC3H15Q8WU90 426 aaKnown RBP7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 MXD3Q9BW11 206 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 CRNKL1Q9BZJ0 848 aaKnown RBP7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 NACAP1Q9BZK3 213 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 KCNQ5Q9NR82 932 aa7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 AATFQ9NY61 560 aaKnown RBP eCLIP7.88□□□□□ -1.15
CTDNEP1-204ENST00000570484 TCRBV5S4A2TA0A5A2 114 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 M0R2C6 588 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 GPR37O15354 613 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 VIL1P09327 827 aaKnown RBP7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 PRKCSHP14314 528 aaPredicted RBP7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 USP5P45974 858 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 CRKP46108 304 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 TDO2P48775 406 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 GMPSP49915 693 aaPredicted RBP7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 HDLBPQ00341 1268 aaKnown RBP7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 DLGAP5Q15398 846 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 OSBP2Q969R2 916 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 PUS7LQ9H0K6 701 aaKnown RBP7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 DAGLAQ9Y4D2 1042 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 SLC4A4Q9Y6R1 1079 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 DOCK2Q92608 1830 aa7.87□□□□□ -1.15
CTDNEP1-204ENST00000570484 GAKO14976 1311 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 H7C1D1 291 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 ST18O60284 1047 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZMYND10O75800 440 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 CHGBP05060 677 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 PRELPP51888 382 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 GRIK5Q16478 980 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 CFAP100Q494V2 611 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 RNF20Q5VTR2 975 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 TYW1BQ6NUM6 668 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 ADGRA1Q86SQ6 560 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZNF589Q86UQ0 364 aaPredicted RBP7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 TEX11Q8IYF3 940 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 LCORLQ8N3X6 602 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 DPF2Q92785 391 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 SEC62Q99442 399 aaKnown RBP7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 BACH2Q9BYV9 841 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 NAPBQ9H115 298 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 CTNNA3Q9UI47 895 aa7.86□□□□□ -1.15
CTDNEP1-204ENST00000570484 RPAP1Q9BWH6 1393 aaPredicted RBP7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 IQCA1LA6NCM1 817 aa7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 EPB41L2O43491 1005 aaKnown RBP7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZKSCAN1P17029 563 aaPredicted RBP7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 DYNLL1P63167 89 aaKnown RBP7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 KIF4BQ2VIQ3 1234 aa7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZDHHC15Q96MV8 337 aa7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 RIOK1Q9BRS2 568 aaKnown RBP7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 DSCC1Q9BVC3 393 aa7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 MYOZ2Q9NPC6 264 aa7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 ARPP21Q9UBL0 812 aaPredicted RBP7.85□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZMYM6O95789 1325 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 AK9Q5TCS8 1911 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 GPR75-ASB3A0A0A6YYF3 556 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms