RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 Q6ZUG5 572 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 ZNF274Q96GC6 653 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 ZDHHC15Q96MV8 337 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 SERPINA10Q9UK55 444 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 TPCN1Q9ULQ1 816 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 TTF2Q9UNY4 1162 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 LAMB1P07942 1786 aa12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 DDX60LQ5H9U9 1706 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-203ENST00000570300 BAZ2AQ9UIF9 1905 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 PRC1O43663 620 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 VIL1P09327 827 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 LIFRP42702 1097 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 BTDP43251 543 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 ANTXR2P58335 489 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 ME3Q16798 604 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 TEKT1Q969V4 418 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 ZNRF3Q9ULT6 936 aa12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.98□□□□□ -0.33
NPLOC4-203ENST00000570300 YDJCA8MPS7 323 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 USP17L12C9JPN9 530 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 USP17L21D6R901 530 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 PFKFB2O60825 505 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 NUCB2P80303 420 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 GMLQ99445 158 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
NPLOC4-203ENST00000570300 COL4A5P29400 1685 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 NEDD4P46934 1319 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 NAV1Q8NEY1 1877 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 NFKBIEO00221 500 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 RCAN1P53805 252 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 CTDSPL2Q05D32 466 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 RSBN1LQ6PCB5 846 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 CLEC17AQ6ZS10 378 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 ESR2Q92731 530 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 BRF1Q92994 677 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 GTF3C6Q969F1 213 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 ZNF277Q9NRM2 450 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 ZSWIM5Q9P217 1185 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 TACC3Q9Y6A5 838 aa12.96□□□□□ -0.33
NPLOC4-203ENST00000570300 MINDY4BA8MYZ0 360 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 LARGE1O95461 756 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 USP5P45974 858 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 CRKP46108 304 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 FGD1P98174 961 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 RAB3GAP1Q15042 981 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 SPRYD3Q8NCJ5 442 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 TCEANC2Q96MN5 208 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 MCM9Q9NXL9 1143 aa12.95□□□□□ -0.34
NPLOC4-203ENST00000570300 NID2Q14112 1375 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 FLT1P17948 1338 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 B4E1Z4 1266 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 KDM4AO75164 1064 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 PDIA3P30101 505 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 PDE4BQ07343 736 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 TGFBRAP1Q8WUH2 860 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 IDI2Q9BXS1 227 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 ECM29Q5VYK3 1845 aa12.94□□□□□ -0.34
NPLOC4-203ENST00000570300 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
NPLOC4-203ENST00000570300 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-203ENST00000570300 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
NPLOC4-203ENST00000570300 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
NPLOC4-203ENST00000570300 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
NPLOC4-203ENST00000570300 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
NPLOC4-203ENST00000570300 MYH1P12882 1939 aa12.92□□□□□ -0.34
NPLOC4-203ENST00000570300 PSMD14O00487 310 aa12.92□□□□□ -0.34
NPLOC4-203ENST00000570300 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-203ENST00000570300 USP17L8P0C7I0 530 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms