RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 ADGRA2Q96PE1 1338 aa26.08■■□□□ 1.77
PKD1-240ENST00000570253 ERICH6Q7L0X2 663 aa26.07■■□□□ 1.76
PKD1-240ENST00000570253 BRCA2P51587 3418 aa26.07■■□□□ 1.76
PKD1-240ENST00000570253 A0A0G2JLL6 359 aaPredicted RBP26.06■■□□□ 1.76
PKD1-240ENST00000570253 ADORA1P30542 326 aa26.06■■□□□ 1.76
PKD1-240ENST00000570253 BTDP43251 543 aa26.06■■□□□ 1.76
PKD1-240ENST00000570253 PICALMQ13492 652 aa26.06■■□□□ 1.76
PKD1-240ENST00000570253 RASGRF1Q13972 1273 aa26.06■■□□□ 1.76
PKD1-240ENST00000570253 PRRT2Q7Z6L0 340 aaPredicted RBP26.06■■□□□ 1.76
PKD1-240ENST00000570253 ZFPM1Q8IX07 1006 aa26.06■■□□□ 1.76
PKD1-240ENST00000570253 SLAIN1Q8ND83 568 aa26.06■■□□□ 1.76
PKD1-240ENST00000570253 A0A1B0GUL7 405 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 SRGAP3O43295 1099 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 CTNND1O60716 968 aaKnown RBP26.05■■□□□ 1.76
PKD1-240ENST00000570253 CYP2C8P10632 490 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 PTPRAP18433 802 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 MOGSQ13724 837 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 MTFR1Q15390 333 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 GORABQ5T7V8 394 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 TRMT2AQ8IZ69 625 aaKnown RBP26.05■■□□□ 1.76
PKD1-240ENST00000570253 SMCR8Q8TEV9 937 aaPredicted RBP26.05■■□□□ 1.76
PKD1-240ENST00000570253 DPF3Q92784 378 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 FAM163AQ96GL9 167 aaPredicted RBP26.05■■□□□ 1.76
PKD1-240ENST00000570253 MEIS3Q99687 375 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 HTATIP2Q9BUP3 242 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 SLC45A1Q9Y2W3 748 aa26.05■■□□□ 1.76
PKD1-240ENST00000570253 PHF20L1A8MW92 1017 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 LDHCP07864 332 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 BCRP11274 1271 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 TIMM10P62072 90 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 GSTO1P78417 241 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 GPAT2Q6NUI2 795 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 RNF208Q9H0X6 261 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 MROH7-TTC4A0A0A0MT08 1334 aa26.04■■□□□ 1.76
PKD1-240ENST00000570253 CTGFP29279 349 aa26.03■■□□□ 1.76
PKD1-240ENST00000570253 XAGE2Q96GT9 111 aa26.03■■□□□ 1.76
PKD1-240ENST00000570253 NEUROD6Q96NK8 337 aa26.03■■□□□ 1.76
PKD1-240ENST00000570253 ATRNL1Q5VV63 1379 aa26.03■■□□□ 1.76
PKD1-240ENST00000570253 DOCK1Q14185 1865 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 MAP4K4O95819 1239 aaPredicted RBP26.02■■□□□ 1.76
PKD1-240ENST00000570253 GJB1P08034 283 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 CCL5P13501 91 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 PRKCZQ05513 592 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 ARHGAP45Q92619 1136 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 PNMA3Q9UL41 463 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 COLQQ9Y215 455 aaPredicted RBP26.02■■□□□ 1.76
PKD1-240ENST00000570253 AFG3L2Q9Y4W6 797 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 MGAMO43451 1857 aa26.02■■□□□ 1.76
PKD1-240ENST00000570253 GJA8P48165 433 aa26.01■■□□□ 1.75
PKD1-240ENST00000570253 TFCP2Q12800 502 aa26.01■■□□□ 1.75
PKD1-240ENST00000570253 RFX7Q2KHR2 1363 aa26.01■■□□□ 1.75
PKD1-240ENST00000570253 DDTLA6NHG4 134 aaPredicted RBP26■■□□□ 1.75
PKD1-240ENST00000570253 TRIM75PA6NK02 468 aa26■■□□□ 1.75
PKD1-240ENST00000570253 H0YGN5 161 aa26■■□□□ 1.75
PKD1-240ENST00000570253 TNPO2O14787 897 aaKnown RBP26■■□□□ 1.75
PKD1-240ENST00000570253 IPO8O15397 1037 aaKnown RBP26■■□□□ 1.75
PKD1-240ENST00000570253 CAPN2P17655 700 aa26■■□□□ 1.75
PKD1-240ENST00000570253 MAP3K10Q02779 954 aa26■■□□□ 1.75
PKD1-240ENST00000570253 NOL10Q9BSC4 688 aaKnown RBP26■■□□□ 1.75
PKD1-240ENST00000570253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26■■□□□ 1.75
PKD1-240ENST00000570253 FXR1P51114 621 aaKnown RBP eCLIP25.99■■□□□ 1.75
PKD1-240ENST00000570253 MECOMQ03112 1051 aa25.99■■□□□ 1.75
PKD1-240ENST00000570253 SH3BP5LQ7L8J4 393 aa25.99■■□□□ 1.75
PKD1-240ENST00000570253 TBC1D2Q9BYX2 928 aa25.99■■□□□ 1.75
PKD1-240ENST00000570253 DDX4Q9NQI0 724 aaKnown RBP25.99■■□□□ 1.75
PKD1-240ENST00000570253 GPR75-ASB3A0A0A6YYF3 556 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 TBC1D12O60347 775 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 NPM3O75607 178 aaKnown RBP25.98■■□□□ 1.75
PKD1-240ENST00000570253 RARSP54136 660 aaKnown RBP25.98■■□□□ 1.75
PKD1-240ENST00000570253 MTX1Q13505 466 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 COA7Q96BR5 231 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 SHISA4Q96DD7 197 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 OSBPL5Q9H0X9 879 aaPredicted RBP25.98■■□□□ 1.75
PKD1-240ENST00000570253 RAI14Q9P0K7 980 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 AGTPBP1Q9UPW5 1226 aa25.98■■□□□ 1.75
PKD1-240ENST00000570253 ADCY3O60266 1144 aa25.97■■□□□ 1.75
PKD1-240ENST00000570253 G3BP1Q13283 466 aaKnown RBP eCLIP25.97■■□□□ 1.75
PKD1-240ENST00000570253 PABPC4Q13310 644 aaKnown RBP eCLIP25.97■■□□□ 1.75
PKD1-240ENST00000570253 SPATA5Q8NB90 893 aa25.97■■□□□ 1.75
PKD1-240ENST00000570253 NR2E3Q9Y5X4 410 aa25.97■■□□□ 1.75
PKD1-240ENST00000570253 CEP290O15078 2479 aa25.96■■□□□ 1.75
PKD1-240ENST00000570253 PTPRFP10586 1907 aa25.96■■□□□ 1.75
PKD1-240ENST00000570253 GNAI2P04899 355 aa25.95■■□□□ 1.74
PKD1-240ENST00000570253 FLT3LGP49771 235 aa25.95■■□□□ 1.74
PKD1-240ENST00000570253 PROCA1Q8NCQ7 364 aaPredicted RBP25.95■■□□□ 1.74
PKD1-240ENST00000570253 PXYLP1Q8TE99 480 aa25.95■■□□□ 1.74
PKD1-240ENST00000570253 U2AF1L4Q8WU68 220 aaKnown RBP25.95■■□□□ 1.74
PKD1-240ENST00000570253 HMG20BQ9P0W2 317 aa25.95■■□□□ 1.74
PKD1-240ENST00000570253 TAOK2Q9UL54 1235 aa25.95■■□□□ 1.74
PKD1-240ENST00000570253 GABRQQ9UN88 632 aa25.95■■□□□ 1.74
PKD1-240ENST00000570253 FARP2O94887 1054 aaPredicted RBP25.94■■□□□ 1.74
PKD1-240ENST00000570253 UQCRFS1P1P0C7P4 283 aa25.94■■□□□ 1.74
PKD1-240ENST00000570253 CHRDL2Q6WN34 429 aa25.94■■□□□ 1.74
PKD1-240ENST00000570253 LRP2BPQ9P2M1 347 aa25.94■■□□□ 1.74
PKD1-240ENST00000570253 COL2A1P02458 1487 aaPredicted RBP25.93■■□□□ 1.74
PKD1-240ENST00000570253 RHBDL3P58872 404 aa25.93■■□□□ 1.74
PKD1-240ENST00000570253 IRF5Q13568 498 aa25.93■■□□□ 1.74
PKD1-240ENST00000570253 NSUN4Q96CB9 384 aaKnown RBP25.93■■□□□ 1.74
PKD1-240ENST00000570253 AS3MTQ9HBK9 375 aa25.93■■□□□ 1.74
PKD1-240ENST00000570253 PHIPQ8WWQ0 1821 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms