RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 SEMA3EO15041 775 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 DIS3L2Q8IYB7 885 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 ADALQ6DHV7 355 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 RBM28Q9NW13 759 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 RCOR1Q9UKL0 485 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 ST3GAL1Q11201 340 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 CYB5R4Q7L1T6 521 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 ANKRD20A12PQ8NF67 263 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 TRPC5Q9UL62 973 aaPredicted RBP13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■□□□□ 11.1
PDXDC1-217ENST00000570001 TNKSO95271 1327 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 DYNLL1P63167 89 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 NEDD4P46934 1319 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 PCDHA7Q9UN72 937 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 PPP2R5BQ15173 497 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 KCNJ14Q9UNX9 436 aa13.41□□□□□ -0.26
PDXDC1-217ENST00000570001 ALX1Q15699 326 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 RILPL1Q5EBL4 403 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 KCPQ6ZWJ8 1503 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 TRIM75PA6NK02 468 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 CBFA2T2O43439 604 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 TPM1P09493 284 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 LIFRP42702 1097 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 CCDC178Q5BJE1 867 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 C5P01031 1676 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 KRT2P35908 639 aa13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
PDXDC1-217ENST00000570001 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 ARID3AQ99856 593 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 CABP5Q9NP86 173 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 CCDC194A0A1B0GVG4 234 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 CFAP100Q494V2 611 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 ZNF202O95125 648 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 F8W031 263 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 KIF23Q02241 960 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 ZSCAN29Q8IWY8 852 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 PGBD1Q96JS3 809 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 AIFM3Q96NN9 605 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 GJB4Q9NTQ9 266 aa13.39□□□□□ -0.27
PDXDC1-217ENST00000570001 PLCG2P16885 1265 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 FGFR2P21802 821 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 COL9A3Q14050 684 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 BMP15O95972 392 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 GNAQP50148 359 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 HSP90AA2PQ14568 343 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 ERCC4Q92889 916 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.274e-7■■□□□ 13.6
PDXDC1-217ENST00000570001 ZC3H12CQ9C0D7 883 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 MRVI1Q9Y6F6 885 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 DHX8Q14562 1220 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 RC3H1Q5TC82 1133 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-217ENST00000570001 UQCRHLA0A096LP55 91 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 MPHOSPH10O00566 681 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 UQCRHP07919 91 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 ANTXR2P58335 489 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 KANK3Q6NY19 840 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 TEX11Q8IYF3 940 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 IKQ13123 557 aaPredicted RBP13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 VGLL2Q8N8G2 317 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 FAM84BQ96KN1 310 aaPredicted RBP13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 LEMD3Q9Y2U8 911 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 XDHP47989 1333 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 MECOMQ03112 1051 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.273e-6■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms