RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 SRRTQ9BXP5 876 aaKnown RBP16.25■□□□□ 0.19
GCOM1-213ENST00000569945 DEF6Q9H4E7 631 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 DONSONQ9NYP3 566 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 PPP1R1BQ9UD71 204 aaPredicted RBP16.25■□□□□ 0.19
GCOM1-213ENST00000569945 FANCGO15287 622 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 ETF1P62495 437 aaKnown RBP16.25■□□□□ 0.19
GCOM1-213ENST00000569945 IFIT5Q13325 482 aaKnown RBP16.25■□□□□ 0.19
GCOM1-213ENST00000569945 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 CRY2Q49AN0 593 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 LRRC24Q50LG9 513 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
GCOM1-213ENST00000569945 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
GCOM1-213ENST00000569945 KLRG2A4D1S0 409 aaPredicted RBP16.24■□□□□ 0.19
GCOM1-213ENST00000569945 CORO7P57737 925 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 SCAND2PQ9GZW5 306 aaPredicted RBP16.24■□□□□ 0.19
GCOM1-213ENST00000569945 CXorf56Q9H5V9 222 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 BCCIPQ9P287 314 aaKnown RBP eCLIP16.24■□□□□ 0.19
GCOM1-213ENST00000569945 C10orf71Q711Q0 1435 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
GCOM1-213ENST00000569945 FOXR1Q6PIV2 292 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
GCOM1-213ENST00000569945 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 LSG1Q9H089 658 aaKnown RBP16.24■□□□□ 0.19
GCOM1-213ENST00000569945 SPON1Q9HCB6 807 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
GCOM1-213ENST00000569945 ANKRD18BA2A2Z9 1011 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 SRGNP10124 158 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 CCDC91Q7Z6B0 441 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 C2CD5Q86YS7 1000 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 DHX40Q8IX18 779 aaKnown RBP16.23■□□□□ 0.19
GCOM1-213ENST00000569945 A0A0G2JLW4 131 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 TRIM65Q6PJ69 517 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 EPC1Q9H2F5 836 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 SH2B1Q9NRF2 756 aaPredicted RBP16.23■□□□□ 0.19
GCOM1-213ENST00000569945 RIC1Q4ADV7 1423 aa16.23■□□□□ 0.19
GCOM1-213ENST00000569945 UTRNP46939 3433 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 SGSM2O43147 1006 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 HSP90B1P14625 803 aaKnown RBP16.22■□□□□ 0.19
GCOM1-213ENST00000569945 CPA1P15085 419 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
GCOM1-213ENST00000569945 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 ARMCX5Q6P1M9 558 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 MNS1Q8NEH6 495 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
GCOM1-213ENST00000569945 CARD6Q9BX69 1037 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 SPEF2Q9C093 1822 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 MAP2K7O14733 419 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 PDE6BP35913 854 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 EVCP57679 992 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 E2F4Q16254 413 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 FERMT3Q86UX7 667 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 GPR161Q8N6U8 529 aaKnown RBP16.22■□□□□ 0.19
GCOM1-213ENST00000569945 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
GCOM1-213ENST00000569945 CEP89Q96ST8 783 aa16.22■□□□□ 0.19
GCOM1-213ENST00000569945 AOX1Q06278 1338 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 DPEP1P16444 411 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 OLFM4Q6UX06 510 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 MMS22LQ6ZRQ5 1243 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 DDX46Q7L014 1031 aaKnown RBP16.21■□□□□ 0.19
GCOM1-213ENST00000569945 ARFGAP3Q9NP61 516 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 DNAI1Q9UI46 699 aa16.21■□□□□ 0.19
GCOM1-213ENST00000569945 RTL9Q8NET4 1388 aa16.21■□□□□ 0.18
GCOM1-213ENST00000569945 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
GCOM1-213ENST00000569945 SASH1O94885 1247 aa16.2■□□□□ 0.18
GCOM1-213ENST00000569945 STX1AQ16623 288 aa16.2■□□□□ 0.18
GCOM1-213ENST00000569945 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
GCOM1-213ENST00000569945 KCNA3P22001 575 aa16.2■□□□□ 0.18
GCOM1-213ENST00000569945 ME3Q16798 604 aa16.2■□□□□ 0.18
GCOM1-213ENST00000569945 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
GCOM1-213ENST00000569945 NLGN2Q8NFZ4 835 aa16.2■□□□□ 0.18
GCOM1-213ENST00000569945 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
GCOM1-213ENST00000569945 KIF1CO43896 1103 aaKnown RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 RPS8P62241 208 aaKnown RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 RSRC2Q7L4I2 434 aaKnown RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 TFIP11Q9UBB9 837 aaKnown RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 H0YIN7 160 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 SNAP23O00161 211 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 EYA2O00167 538 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 GRAPQ13588 217 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
GCOM1-213ENST00000569945 IL1RAPL2Q9NP60 686 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 MED4Q9NPJ6 270 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
GCOM1-213ENST00000569945 NPR1P16066 1061 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms