RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 RASGRF1Q13972 1273 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 C4orf17Q53FE4 359 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 PRPF40BQ6NWY9 871 aaKnown RBP4.29□□□□□ -1.72
CNOT1-221ENST00000569924 C16orf86Q6ZW13 317 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 SPNS2Q8IVW8 549 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 NKD1Q969G9 470 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 KLRG1Q96E93 195 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 HSH2DQ96JZ2 352 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 AGBL1Q96MI9 1066 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 C11orf16Q9NQ32 467 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 TMEM260Q9NX78 707 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 SLIT2O94813 1529 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 KNDC1Q76NI1 1749 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 CCDC144AA2RUR9 1427 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 SPATA31E1Q6ZUB1 1445 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 KIF1AQ12756 1690 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 SPATA31A3Q5VYP0 1347 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 ADGRF5Q8IZF2 1346 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 CCDC194A0A1B0GVG4 234 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 TMEM238LA0A1B0GVL6 79 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 PDPK1O15530 556 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 XYLBO75191 536 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 EGFRP00533 1210 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 EDN3P14138 238 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 EPB42P16452 691 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 TATP17735 454 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 CES1P23141 567 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 LIG3P49916 1009 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 RELBQ01201 579 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 FAM160A1Q05DH4 1040 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 CAMK2GQ13555 558 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 GRIN2CQ14957 1233 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 MAP3K11Q16584 847 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 DDR2Q16832 855 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 SLC27A3Q5K4L6 730 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 GORABQ5T7V8 394 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 BICDL1Q6ZP65 573 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 NLRP13Q86W25 1043 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 UNC5CLQ8IV45 518 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 CELF2-AS1Q8N7Q2 184 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 GOLM1Q8NBJ4 401 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 EMID1Q96A84 441 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 MRGPRX2Q96LB1 330 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 FEZ1Q99689 392 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 OXCT2Q9BYC2 517 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 ZNF395Q9H8N7 513 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 ZFYVE1Q9HBF4 777 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 G3BP2Q9UN86 482 aaKnown RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 TLR6Q9Y2C9 796 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 AKAP2Q9Y2D5 859 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 FMN2Q9NZ56 1722 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 IFT172Q9UG01 1749 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 PIK3C2GO75747 1445 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 BLMP54132 1417 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-221ENST00000569924 EP400Q96L91 3159 aa4.28□□□□□ -1.72
CNOT1-221ENST00000569924 GLI3P10071 1580 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 VIL1P09327 827 aaKnown RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 GRNP28799 593 aaKnown RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 CRKP46108 304 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 GIPRP48546 466 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 RNF144AP50876 292 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 EIF6P56537 245 aaKnown RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 NNTQ13423 1086 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 SQSTM1Q13501 440 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 VPS72Q15906 364 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 SNAP47Q5SQN1 464 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 TTC39BQ5VTQ0 682 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 PEAR1Q5VY43 1037 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 DTHD1Q6ZMT9 781 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 FAM196AQ6ZSG2 479 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 WAPLQ7Z5K2 1190 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 FAM169BQ8N8A8 192 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 KLF16Q9BXK1 252 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 CEP44Q9C0F1 390 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 ABCB6Q9NP58 842 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 USP32Q8NFA0 1604 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 YTHDC2Q9H6S0 1430 aaKnown RBP4.27□□□□□ -1.73
CNOT1-221ENST00000569924 SBNO1A3KN83 1393 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 PLEKHH1Q9ULM0 1364 aa4.27□□□□□ -1.73
CNOT1-221ENST00000569924 NWD2Q9ULI1 1742 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 NRXN1Q9ULB1 1477 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 SPATA31C2B4DYI2 1134 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 FBXO24O75426 580 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 ZIC2O95409 532 aaPredicted RBP4.26□□□□□ -1.73
CNOT1-221ENST00000569924 KCNC4Q03721 635 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 C2orf27AQ580R0 203 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 TMEM132EQ6IEE7 984 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 CCDC81Q6ZN84 652 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 AGMOQ6ZNB7 445 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 KRT28Q7Z3Y7 464 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 KRT26Q7Z3Y9 468 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 FMNL3Q8IVF7 1028 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 EXOC8Q8IYI6 725 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 SYNPOQ8N3V7 929 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 JMYQ8N9B5 988 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 OR6P1Q8NGX9 317 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 THAP3Q8WTV1 239 aaPredicted RBP4.26□□□□□ -1.73
CNOT1-221ENST00000569924 JDP2Q8WYK2 163 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 ITPKCQ96DU7 683 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms