RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
UBFD1-209ENST00000569919 HOXC9P31274 260 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
UBFD1-209ENST00000569919 ZCCHC2Q9C0B9 1178 aaKnown RBP8.34□□□□□ -1.07
UBFD1-209ENST00000569919 SLC12A5Q9H2X9 1139 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 BRD7Q9NPI1 651 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 KCNMB2Q9Y691 235 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 PALLDQ8WX93 1383 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 SBNO2Q9Y2G9 1366 aa8.34□□□□□ -1.07
UBFD1-209ENST00000569919 KDM2BQ8NHM5 1336 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 LTN1O94822 1766 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 A0A0G2JLW4 131 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 THBS1P07996 1170 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 HTRA3P83110 453 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 LBRQ14739 615 aaKnown RBP8.33□□□□□ -1.08
UBFD1-209ENST00000569919 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
UBFD1-209ENST00000569919 NBPF6Q5VWK0 638 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 COG3Q96JB2 828 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 TRIM47Q96LD4 638 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 NBPF4Q96M43 638 aa8.33□□□□□ -1.08
UBFD1-209ENST00000569919 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
UBFD1-209ENST00000569919 KIAA1522Q9P206 1035 aaPredicted RBP8.33□□□□□ -1.08
UBFD1-209ENST00000569919 GMPR2Q9P2T1 348 aaKnown RBP8.33□□□□□ -1.08
UBFD1-209ENST00000569919 FNDC3AQ9Y2H6 1198 aaKnown RBP8.33□□□□□ -1.08
UBFD1-209ENST00000569919 EDC4Q6P2E9 1401 aaKnown RBP8.32□□□□□ -1.08
UBFD1-209ENST00000569919 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
UBFD1-209ENST00000569919 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
UBFD1-209ENST00000569919 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
UBFD1-209ENST00000569919 NUCKS1Q9H1E3 243 aaKnown RBP8.32□□□□□ -1.08
UBFD1-209ENST00000569919 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
UBFD1-209ENST00000569919 GOLGB1Q14789 3259 aaKnown RBP8.32□□□□□ -1.08
UBFD1-209ENST00000569919 MAP3K19Q56UN5 1328 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 USP54Q70EL1 1684 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 H7C1W4 665 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 ATXN7O15265 892 aaPredicted RBP8.31□□□□□ -1.08
UBFD1-209ENST00000569919 MMP10P09238 476 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 TMF1P82094 1093 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 ORC1Q13415 861 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 ENOX2Q16206 610 aaKnown RBP8.31□□□□□ -1.08
UBFD1-209ENST00000569919 DBN1Q16643 649 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 XKR5Q6UX68 686 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 AMIGO3Q86WK7 504 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 SMC1BQ8NDV3 1235 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
UBFD1-209ENST00000569919 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 ROCK2O75116 1388 aaKnown RBP8.31□□□□□ -1.08
UBFD1-209ENST00000569919 DOT1LQ8TEK3 1739 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 WDR90Q96KV7 1748 aa8.31□□□□□ -1.08
UBFD1-209ENST00000569919 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
UBFD1-209ENST00000569919 MON2Q7Z3U7 1717 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 XYLBO75191 536 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 NEFLP07196 543 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 FAM157BP0CG42 384 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
UBFD1-209ENST00000569919 DPEP1P16444 411 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 SIK1P57059 783 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 UBAP2LQ14157 1087 aaKnown RBP8.3□□□□□ -1.08
UBFD1-209ENST00000569919 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 PDE12Q6L8Q7 609 aaKnown RBP8.3□□□□□ -1.08
UBFD1-209ENST00000569919 SMIM5Q71RC9 77 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 ZNF438Q7Z4V0 828 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 TRIM22Q8IYM9 498 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 PIGBQ92521 554 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 CSRNP1Q96S65 589 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 PLEKHG2Q9H7P9 1386 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 C5P01031 1676 aa8.3□□□□□ -1.08
UBFD1-209ENST00000569919 CICQ96RK0 1608 aaPredicted RBP8.29□□□□□ -1.08
UBFD1-209ENST00000569919 TAF1LQ8IZX4 1826 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 DCDC2BA2VCK2 349 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 EIF1AYO14602 144 aaKnown RBP8.29□□□□□ -1.08
UBFD1-209ENST00000569919 KHNYNO15037 678 aaKnown RBP8.29□□□□□ -1.08
UBFD1-209ENST00000569919 CYP27B1O15528 508 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 HSPA1AP0DMV8 641 aaKnown RBP8.29□□□□□ -1.08
UBFD1-209ENST00000569919 HSPA1BP0DMV9 641 aaKnown RBP8.29□□□□□ -1.08
UBFD1-209ENST00000569919 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
UBFD1-209ENST00000569919 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 C11orf16Q9NQ32 467 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 CD163L1Q9NR16 1453 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 MEGF6O75095 1541 aa8.29□□□□□ -1.08
UBFD1-209ENST00000569919 PXDNLA1KZ92 1463 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 EFSO43281 561 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
UBFD1-209ENST00000569919 EGFRP00533 1210 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 KCNA3P22001 575 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 FBLN1P23142 703 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms