RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 PUS10Q3MIT2 529 aaKnown RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 TXNRD3Q86VQ6 643 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 FAM84BQ96KN1 310 aaPredicted RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 NSFL1CQ9UNZ2 370 aaKnown RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 ZNF646O15015 1829 aaPredicted RBP12.07□□□□□ -0.48
GDE1-205ENST00000569899 MED23Q9ULK4 1368 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 SGSM2O43147 1006 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 CYP2E1P05181 493 aaPredicted RBP12.07□□□□□ -0.48
GDE1-205ENST00000569899 POLD1P28340 1107 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 SPATA5Q8NB90 893 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 PIH1D3Q9NQM4 214 aaKnown RBP12.07□□□□□ -0.48
GDE1-205ENST00000569899 PODXL2Q9NZ53 605 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 GGA1Q9UJY5 639 aa12.07□□□□□ -0.48
GDE1-205ENST00000569899 SNED1Q8TER0 1413 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 HIP1O00291 1037 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 ATP2B4P23634 1241 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 GRIPAP1Q4V328 841 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 FBXO33Q7Z6M2 555 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
GDE1-205ENST00000569899 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
GDE1-205ENST00000569899 REC8O95072 547 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 MORN1Q5T089 497 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 ANO2Q9NQ90 1003 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 POLLQ9UGP5 575 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 RAD50Q92878 1312 aa12.05□□□□□ -0.48
GDE1-205ENST00000569899 FDX1P10109 184 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 DPEP1P16444 411 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 HIBADHP31937 336 aaKnown RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 GJA5P36382 358 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 USP26Q9BXU7 913 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 GNL3LQ9NVN8 582 aaKnown RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 SCN9AQ15858 1988 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 PSME4Q14997 1843 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 C6orf229H3BNL8 230 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 TTF1Q15361 905 aaPredicted RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 CCDC129Q6ZRS4 1044 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 C15orf52Q6ZUT6 534 aaKnown RBP12.04□□□□□ -0.48
GDE1-205ENST00000569899 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
GDE1-205ENST00000569899 LAMA4Q16363 1823 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
GDE1-205ENST00000569899 KCNA3P22001 575 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
GDE1-205ENST00000569899 RBM25P49756 843 aaKnown RBP12.03□□□□□ -0.48
GDE1-205ENST00000569899 ZMYM1Q5SVZ6 1142 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 DPP8Q6V1X1 898 aaPredicted RBP12.03□□□□□ -0.48
GDE1-205ENST00000569899 ZNF804AQ7Z570 1209 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 MPNDQ8N594 471 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
GDE1-205ENST00000569899 LSG1Q9H089 658 aaKnown RBP12.03□□□□□ -0.48
GDE1-205ENST00000569899 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 MAST3O60307 1309 aa12.03□□□□□ -0.48
GDE1-205ENST00000569899 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
GDE1-205ENST00000569899 CHAF1AQ13111 956 aaPredicted RBP12.02□□□□□ -0.49
GDE1-205ENST00000569899 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 BLOC1S3Q6QNY0 202 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.49
GDE1-205ENST00000569899 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 JAG2Q9Y219 1238 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 SLC27A5Q9Y2P5 690 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 MYH2Q9UKX2 1941 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 PDS5AQ29RF7 1337 aaKnown RBP12.02□□□□□ -0.49
GDE1-205ENST00000569899 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.49
GDE1-205ENST00000569899 M0R2C6 588 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 PDE6AP16499 860 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 ADD2P35612 726 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 PTH1RQ03431 593 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 TTLL6Q8N841 843 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 TDRD7Q8NHU6 1098 aaKnown RBP12.01□□□□□ -0.49
GDE1-205ENST00000569899 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
GDE1-205ENST00000569899 TMX4Q9H1E5 349 aaPredicted RBP12.01□□□□□ -0.49
GDE1-205ENST00000569899 PPP1R1BQ9UD71 204 aaPredicted RBP12.01□□□□□ -0.49
GDE1-205ENST00000569899 C21orf2O43822 256 aa12□□□□□ -0.49
GDE1-205ENST00000569899 ZFYP08048 801 aaPredicted RBP12□□□□□ -0.49
GDE1-205ENST00000569899 WASHC4Q2M389 1173 aa12□□□□□ -0.49
GDE1-205ENST00000569899 LRRFIP1Q32MZ4 808 aaKnown RBP12□□□□□ -0.49
GDE1-205ENST00000569899 MCMDC2Q4G0Z9 681 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms