RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 C17orf99Q6UX52 265 aa16.19■□□□□ 0.18
SPG7-221ENST00000569720 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 BCAR3O75815 825 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 HOXD10P28358 340 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 MECOMQ03112 1051 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 PICALMQ13492 652 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 SCYL3Q8IZE3 742 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 PARK7Q99497 189 aaKnown RBP16.18■□□□□ 0.18
SPG7-221ENST00000569720 ARHGAP39Q9C0H5 1083 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 CPA4Q9UI42 421 aa16.18■□□□□ 0.18
SPG7-221ENST00000569720 RFX7Q2KHR2 1363 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 PHF20L1A8MW92 1017 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
SPG7-221ENST00000569720 EN2P19622 333 aaPredicted RBP16.17■□□□□ 0.18
SPG7-221ENST00000569720 ZKSCAN2Q63HK3 967 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 FASTKD5Q7L8L6 764 aaKnown RBP16.17■□□□□ 0.18
SPG7-221ENST00000569720 SPATA5Q8NB90 893 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 GCC1Q96CN9 775 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 HMG20BQ9P0W2 317 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 ZHX2Q9Y6X8 837 aa16.17■□□□□ 0.18
SPG7-221ENST00000569720 GPR75-ASB3A0A0A6YYF3 556 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
SPG7-221ENST00000569720 CTNND1O60716 968 aaKnown RBP16.16■□□□□ 0.18
SPG7-221ENST00000569720 FMNL1O95466 1100 aaPredicted RBP16.16■□□□□ 0.18
SPG7-221ENST00000569720 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
SPG7-221ENST00000569720 PSMC4P43686 418 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 SH3BP5LQ7L8J4 393 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 RAI14Q9P0K7 980 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 MGAMO43451 1857 aa16.16■□□□□ 0.18
SPG7-221ENST00000569720 PTPRFP10586 1907 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 A0A0G2JLL6 359 aaPredicted RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 PTPRAP18433 802 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 MOGSQ13724 837 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 GADL1Q6ZQY3 521 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 PRRT2Q7Z6L0 340 aaPredicted RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 SH3TC2Q8TF17 1288 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 NSUN4Q96CB9 384 aaKnown RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 DDX4Q9NQI0 724 aaKnown RBP16.15■□□□□ 0.18
SPG7-221ENST00000569720 SRRDQ9UH36 339 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 ADGRA2Q96PE1 1338 aa16.15■□□□□ 0.18
SPG7-221ENST00000569720 RHBDL3P58872 404 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
SPG7-221ENST00000569720 GPAT2Q6NUI2 795 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 RAET1EQ8TD07 263 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.14■□□□□ 0.17
SPG7-221ENST00000569720 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
SPG7-221ENST00000569720 TBC1D12O60347 775 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 MYCP01106 439 aaPredicted RBP16.13■□□□□ 0.17
SPG7-221ENST00000569720 CCDC158Q5M9N0 1113 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 TTC39AQ5SRH9 613 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
SPG7-221ENST00000569720 TRIM47Q96LD4 638 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPG7-221ENST00000569720 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 SLC45A1Q9Y2W3 748 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 MYPNQ86TC9 1320 aa16.13■□□□□ 0.17
SPG7-221ENST00000569720 ATAD5Q96QE3 1844 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 COL2A1P02458 1487 aaPredicted RBP16.12■□□□□ 0.17
SPG7-221ENST00000569720 CYP2C8P10632 490 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 BCRP11274 1271 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 OSBPP22059 807 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 MCAMP43121 646 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 FCGRTP55899 365 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPG7-221ENST00000569720 ZNF384Q8TF68 577 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 BRCA2P51587 3418 aa16.12■□□□□ 0.17
SPG7-221ENST00000569720 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 BAG3O95817 575 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 CTGFP29279 349 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 GRK4P32298 578 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 ATP8B2P98198 1209 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 POLA2Q14181 598 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 TEX11Q8IYF3 940 aa16.11■□□□□ 0.17
SPG7-221ENST00000569720 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
SPG7-221ENST00000569720 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
SPG7-221ENST00000569720 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
SPG7-221ENST00000569720 SURF6O75683 361 aaKnown RBP16.1■□□□□ 0.17
SPG7-221ENST00000569720 PLCG2P16885 1265 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
SPG7-221ENST00000569720 SSH3Q8TE77 659 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 PCDH10Q9P2E7 1040 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 BIN2Q9UBW5 565 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms