RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
UBR1-210ENST00000569337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
UBR1-210ENST00000569337 NSUN4Q96CB9 384 aaKnown RBP11.42□□□□□ -0.58
UBR1-210ENST00000569337 WNK4Q96J92 1243 aa11.42□□□□□ -0.58
UBR1-210ENST00000569337 IDI2Q9BXS1 227 aa11.42□□□□□ -0.58
UBR1-210ENST00000569337 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
UBR1-210ENST00000569337 FAM198AQ9UFP1 575 aa11.42□□□□□ -0.58
UBR1-210ENST00000569337 ENTPD3O75355 529 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 CYP2E1P05181 493 aaPredicted RBP11.41□□□□□ -0.58
UBR1-210ENST00000569337 MX1P20591 662 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 RGS3P49796 1198 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 PDE1AP54750 535 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 VGLL4Q14135 290 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 NAA16Q6N069 864 aaPredicted RBP11.41□□□□□ -0.58
UBR1-210ENST00000569337 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 ZNF384Q8TF68 577 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 OPTNQ96CV9 577 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 NOL10Q9BSC4 688 aaKnown RBP11.41□□□□□ -0.58
UBR1-210ENST00000569337 ZNF341Q9BYN7 854 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
UBR1-210ENST00000569337 STAP2Q9UGK3 403 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 AK9Q5TCS8 1911 aa11.41□□□□□ -0.58
UBR1-210ENST00000569337 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
UBR1-210ENST00000569337 IGSF3O75054 1194 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 TBC1D8O95759 1140 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 BAG3O95817 575 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
UBR1-210ENST00000569337 ALDH1A1P00352 501 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 PICALMQ13492 652 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 ZFPM1Q8IX07 1006 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 ZKSCAN4Q969J2 545 aaPredicted RBP11.4□□□□□ -0.58
UBR1-210ENST00000569337 ECHDC1Q9NTX5 307 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 NDUFB9Q9Y6M9 179 aa11.4□□□□□ -0.58
UBR1-210ENST00000569337 WDHD1O75717 1129 aaPredicted RBP11.39□□□□□ -0.59
UBR1-210ENST00000569337 CAPN15O75808 1086 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 IDH1O75874 414 aaKnown RBP11.39□□□□□ -0.59
UBR1-210ENST00000569337 ATP5JP18859 108 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 GJA5P36382 358 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 RHBDL3P58872 404 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 OTUD7BQ6GQQ9 843 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 OSBPL3Q9H4L5 887 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
UBR1-210ENST00000569337 PIH1D3Q9NQM4 214 aaKnown RBP11.39□□□□□ -0.59
UBR1-210ENST00000569337 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
UBR1-210ENST00000569337 TTC41PQ6P2S7 1318 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 PLCG2P16885 1265 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 INPP5BP32019 993 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 GTF2A2P52657 109 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 TEX11Q8IYF3 940 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 BOLA2Q9H3K6 86 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 ZNF112Q9UJU3 913 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 SNCAIPQ9Y6H5 919 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 MYH7P12883 1935 aa11.38□□□□□ -0.59
UBR1-210ENST00000569337 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
UBR1-210ENST00000569337 DDTLA6NHG4 134 aaPredicted RBP11.37□□□□□ -0.59
UBR1-210ENST00000569337 IGF2BP3O00425 579 aaKnown RBP eCLIP11.37□□□□□ -0.59
UBR1-210ENST00000569337 GSPT1P15170 499 aaKnown RBP11.37□□□□□ -0.59
UBR1-210ENST00000569337 CYP7A1P22680 504 aa11.37□□□□□ -0.59
UBR1-210ENST00000569337 MAP3K12Q12852 859 aa11.37□□□□□ -0.59
UBR1-210ENST00000569337 DGKZQ13574 1117 aa11.37□□□□□ -0.59
UBR1-210ENST00000569337 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
UBR1-210ENST00000569337 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
UBR1-210ENST00000569337 SH3RF3Q8TEJ3 882 aaPredicted RBP11.37□□□□□ -0.59
UBR1-210ENST00000569337 EDC3Q96F86 508 aaKnown RBP11.37□□□□□ -0.59
UBR1-210ENST00000569337 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
UBR1-210ENST00000569337 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
UBR1-210ENST00000569337 CCL15-CCL14A0A0B4J2E2 113 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 TESPA1A2RU30 521 aaPredicted RBP11.36□□□□□ -0.59
UBR1-210ENST00000569337 GPR25O00155 361 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 GLRX3O76003 335 aaKnown RBP11.36□□□□□ -0.59
UBR1-210ENST00000569337 PPP4CP60510 307 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 PPATQ06203 517 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 SNAPC2Q13487 334 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 CCL15Q16663 113 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 TTC22Q5TAA0 569 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBR1-210ENST00000569337 ZNF296Q8WUU4 475 aaPredicted RBP11.36□□□□□ -0.59
UBR1-210ENST00000569337 HAUS7Q99871 368 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 PTPN18Q99952 460 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 CFHR5Q9BXR6 569 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
UBR1-210ENST00000569337 IRF6O14896 467 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 CETPP11597 493 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 PPIL2Q13356 520 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 NOM1Q5C9Z4 860 aaKnown RBP11.35□□□□□ -0.59
UBR1-210ENST00000569337 NOL9Q5SY16 702 aaKnown RBP11.35□□□□□ -0.59
UBR1-210ENST00000569337 TMED8Q6PL24 325 aaPredicted RBP11.35□□□□□ -0.59
UBR1-210ENST00000569337 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 MAGEB6Q8N7X4 407 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 BRI3BPQ8WY22 251 aa11.35□□□□□ -0.59
UBR1-210ENST00000569337 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms