RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
CDH3-210ENST00000569117 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
CDH3-210ENST00000569117 IL25Q9H293 177 aa12.55□□□□□ -0.4
CDH3-210ENST00000569117 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
CDH3-210ENST00000569117 GPR75-ASB3A0A0A6YYF3 556 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 GLTPD2A6NH11 291 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 M0R2C6 588 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 GPR37O15354 613 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 GPAA1O43292 621 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 DDNO94850 711 aaPredicted RBP12.54□□□□□ -0.4
CDH3-210ENST00000569117 MBD4O95243 580 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 BTDP43251 543 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
CDH3-210ENST00000569117 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
CDH3-210ENST00000569117 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 MIGA1Q8NAN2 632 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 SEC62Q99442 399 aaKnown RBP12.54□□□□□ -0.4
CDH3-210ENST00000569117 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
CDH3-210ENST00000569117 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
CDH3-210ENST00000569117 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 BAG3O95817 575 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
CDH3-210ENST00000569117 PPP4CP60510 307 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 DSG2Q14126 1118 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 CFAP100Q494V2 611 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 LCORLQ8N3X6 602 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
CDH3-210ENST00000569117 MYOZ2Q9NPC6 264 aa12.53□□□□□ -0.4
CDH3-210ENST00000569117 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
CDH3-210ENST00000569117 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.4
CDH3-210ENST00000569117 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
CDH3-210ENST00000569117 EIF5BO60841 1220 aaKnown RBP12.52□□□□□ -0.41
CDH3-210ENST00000569117 PLCG2P16885 1265 aa12.52□□□□□ -0.41
CDH3-210ENST00000569117 APOBEC3HQ6NTF7 200 aaKnown RBP12.52□□□□□ -0.41
CDH3-210ENST00000569117 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
CDH3-210ENST00000569117 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.41
CDH3-210ENST00000569117 STRBPQ96SI9 672 aaKnown RBP12.52□□□□□ -0.41
CDH3-210ENST00000569117 AATFQ9NY61 560 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDH3-210ENST00000569117 MYH1P12882 1939 aa12.52□□□□□ -0.41
CDH3-210ENST00000569117 RPAP1Q9BWH6 1393 aaPredicted RBP12.52□□□□□ -0.41
CDH3-210ENST00000569117 H7C1D1 291 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 REC8O95072 547 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 GNAT2P19087 354 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
CDH3-210ENST00000569117 RHBDL3P58872 404 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
CDH3-210ENST00000569117 DLGAP5Q15398 846 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
CDH3-210ENST00000569117 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
CDH3-210ENST00000569117 FOXP2O15409 715 aa12.5□□□□□ -0.41
CDH3-210ENST00000569117 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
CDH3-210ENST00000569117 EGFRP00533 1210 aa12.5□□□□□ -0.41
CDH3-210ENST00000569117 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDH3-210ENST00000569117 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
CDH3-210ENST00000569117 SH3RF3Q8TEJ3 882 aaPredicted RBP12.5□□□□□ -0.41
CDH3-210ENST00000569117 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
CDH3-210ENST00000569117 ADARB2Q9NS39 739 aaKnown RBP12.5□□□□□ -0.41
CDH3-210ENST00000569117 PCDHAC2Q9Y5I4 1007 aa12.5□□□□□ -0.41
CDH3-210ENST00000569117 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
CDH3-210ENST00000569117 IQCA1LA6NCM1 817 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 WNT10BO00744 389 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
CDH3-210ENST00000569117 EPS15P42566 896 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
CDH3-210ENST00000569117 CDC42EP5Q6NZY7 148 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 TEX11Q8IYF3 940 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 TRPM4Q8TD43 1214 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 PRMT6Q96LA8 375 aaPredicted RBP12.49□□□□□ -0.41
CDH3-210ENST00000569117 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 BACH2Q9BYV9 841 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
CDH3-210ENST00000569117 EPB41L4AQ9HCS5 686 aaPredicted RBP12.49□□□□□ -0.41
CDH3-210ENST00000569117 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
CDH3-210ENST00000569117 FLT1P17948 1338 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 MYO1BO43795 1136 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
CDH3-210ENST00000569117 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 FKBP1CQ5VVH2 108 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 TDRD3Q9H7E2 651 aaKnown RBP12.48□□□□□ -0.41
CDH3-210ENST00000569117 ATP8A2Q9NTI2 1148 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
CDH3-210ENST00000569117 POTECB2RU33 542 aa12.47□□□□□ -0.41
CDH3-210ENST00000569117 PRKAB2O43741 272 aa12.47□□□□□ -0.41
CDH3-210ENST00000569117 SEC24BO95487 1268 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms