RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
CDH3-208ENST00000569036 TEKT1Q969V4 418 aa14.41□□□□□ -0.1
CDH3-208ENST00000569036 SENP6Q9GZR1 1112 aaPredicted RBP14.41□□□□□ -0.1
CDH3-208ENST00000569036 H7C1W4 665 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 DDX58O95786 925 aaKnown RBP14.4□□□□□ -0.1
CDH3-208ENST00000569036 CSF1RP07333 972 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 ATN1P54259 1190 aaPredicted RBP14.4□□□□□ -0.1
CDH3-208ENST00000569036 RTP1P59025 263 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 CWF19L2Q2TBE0 894 aaKnown RBP14.4□□□□□ -0.1
CDH3-208ENST00000569036 ZDHHC15Q96MV8 337 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 PLA2G12BQ9BX93 195 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 ZHX2Q9Y6X8 837 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 MYO9BQ13459 2157 aa14.4□□□□□ -0.1
CDH3-208ENST00000569036 RLFQ13129 1914 aa14.39□□□□□ -0.11
CDH3-208ENST00000569036 CYP2B6P20813 491 aa14.39□□□□□ -0.11
CDH3-208ENST00000569036 CCND3P30281 292 aaPredicted RBP14.39□□□□□ -0.11
CDH3-208ENST00000569036 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
CDH3-208ENST00000569036 AKNAD1Q5T1N1 836 aa14.39□□□□□ -0.11
CDH3-208ENST00000569036 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
CDH3-208ENST00000569036 BADQ92934 168 aa14.39□□□□□ -0.11
CDH3-208ENST00000569036 AGTPBP1Q9UPW5 1226 aa14.39□□□□□ -0.11
CDH3-208ENST00000569036 AFG3L2Q9Y4W6 797 aa14.39□□□□□ -0.11
CDH3-208ENST00000569036 DOCK2Q92608 1830 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 DOCK1Q14185 1865 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 ANKRD18BA2A2Z9 1011 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 NEURL1BA8MQ27 555 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 PTPRAP18433 802 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 DNAJB2P25686 324 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 GYG1P46976 350 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 PDE3AQ14432 1141 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 FAM151AQ8WW52 585 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 ZNF576Q9H609 170 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 EPHX3Q9H6B9 360 aa14.38□□□□□ -0.11
CDH3-208ENST00000569036 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
CDH3-208ENST00000569036 HIBADHP31937 336 aaKnown RBP14.37□□□□□ -0.11
CDH3-208ENST00000569036 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
CDH3-208ENST00000569036 TREML2Q5T2D2 321 aa14.37□□□□□ -0.11
CDH3-208ENST00000569036 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
CDH3-208ENST00000569036 PNMA3Q9UL41 463 aa14.37□□□□□ -0.11
CDH3-208ENST00000569036 ATP11BQ9Y2G3 1177 aa14.37□□□□□ -0.11
CDH3-208ENST00000569036 CHD7Q9P2D1 2997 aa14.37□□□□□ -0.11
CDH3-208ENST00000569036 PLIN1O60240 522 aa14.36□□□□□ -0.11
CDH3-208ENST00000569036 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
CDH3-208ENST00000569036 MRE11P49959 708 aa14.36□□□□□ -0.11
CDH3-208ENST00000569036 CASP7P55210 303 aa14.36□□□□□ -0.11
CDH3-208ENST00000569036 TCP10Q12799 353 aa14.36□□□□□ -0.11
CDH3-208ENST00000569036 GAS2L1Q99501 681 aaPredicted RBP14.36□□□□□ -0.11
CDH3-208ENST00000569036 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
CDH3-208ENST00000569036 PRDM5Q9NQX1 630 aaPredicted RBP14.36□□□□□ -0.11
CDH3-208ENST00000569036 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
CDH3-208ENST00000569036 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 ZNF316A6NFI3 1004 aaPredicted RBP14.35□□□□□ -0.11
CDH3-208ENST00000569036 TRIM75PA6NK02 468 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 PHF20L1A8MW92 1017 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
CDH3-208ENST00000569036 GCLCP48506 637 aaPredicted RBP14.35□□□□□ -0.11
CDH3-208ENST00000569036 NEXNQ0ZGT2 675 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 KSR2Q6VAB6 950 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 FAM84BQ96KN1 310 aaPredicted RBP14.35□□□□□ -0.11
CDH3-208ENST00000569036 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
CDH3-208ENST00000569036 BMP1P13497 986 aa14.34□□□□□ -0.11
CDH3-208ENST00000569036 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
CDH3-208ENST00000569036 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
CDH3-208ENST00000569036 CCDC85BQ15834 202 aaPredicted RBP14.34□□□□□ -0.11
CDH3-208ENST00000569036 TRMT44Q8IYL2 757 aaKnown RBP14.34□□□□□ -0.11
CDH3-208ENST00000569036 SOCS4Q8WXH5 440 aa14.34□□□□□ -0.11
CDH3-208ENST00000569036 PDLIM7Q9NR12 457 aa14.34□□□□□ -0.11
CDH3-208ENST00000569036 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
CDH3-208ENST00000569036 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
CDH3-208ENST00000569036 NFIAQ12857 509 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 IFIT5Q13325 482 aaKnown RBP14.33□□□□□ -0.12
CDH3-208ENST00000569036 CCL14Q16627 93 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 TBC1D22AQ8WUA7 517 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 TIFAQ96CG3 184 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 NUDT12Q9BQG2 462 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 PRDM12Q9H4Q4 367 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 MBIPQ9NS73 344 aa14.33□□□□□ -0.12
CDH3-208ENST00000569036 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.33□□□□□ -0.12
CDH3-208ENST00000569036 WDFY4Q6ZS81 3184 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 TRIM43BA6NCK2 446 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
CDH3-208ENST00000569036 EPHB4P54760 987 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 GCKRQ14397 625 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 TRIM43Q96BQ3 446 aaPredicted RBP14.32□□□□□ -0.12
CDH3-208ENST00000569036 CXXC1Q9P0U4 656 aaPredicted RBP14.32□□□□□ -0.12
CDH3-208ENST00000569036 DAGLAQ9Y4D2 1042 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 MAST3O60307 1309 aa14.32□□□□□ -0.12
CDH3-208ENST00000569036 PLXNA1Q9UIW2 1896 aa14.31□□□□□ -0.12
CDH3-208ENST00000569036 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.31□□□□□ -0.12
CDH3-208ENST00000569036 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.31□□□□□ -0.12
CDH3-208ENST00000569036 DNM1LO00429 736 aa14.31□□□□□ -0.12
CDH3-208ENST00000569036 UBE4AQ14139 1066 aa14.31□□□□□ -0.12
CDH3-208ENST00000569036 ADGRE1Q14246 886 aa14.31□□□□□ -0.12
CDH3-208ENST00000569036 CCDC84Q86UT8 332 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms