RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 CXCL11O14625 94 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 PICALMQ13492 652 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 SLC4A8Q2Y0W8 1093 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 SCYL3Q8IZE3 742 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 RFX7Q2KHR2 1363 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 ATRNL1Q5VV63 1379 aa16.87■□□□□ 0.29
CNOT1-215ENST00000569020 PHIPQ8WWQ0 1821 aa16.86■□□□□ 0.29
CNOT1-215ENST00000569020 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
CNOT1-215ENST00000569020 HOXD10P28358 340 aa16.86■□□□□ 0.29
CNOT1-215ENST00000569020 MECOMQ03112 1051 aa16.86■□□□□ 0.29
CNOT1-215ENST00000569020 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.29
CNOT1-215ENST00000569020 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
CNOT1-215ENST00000569020 KIAA0100Q14667 2235 aaKnown RBP16.85■□□□□ 0.29
CNOT1-215ENST00000569020 ATAD5Q96QE3 1844 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 GPR75-ASB3A0A0A6YYF3 556 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 DDTLA6NHG4 134 aaPredicted RBP16.85■□□□□ 0.29
CNOT1-215ENST00000569020 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 BCAR3O75815 825 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 LDHCP07864 332 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 PTPRAP18433 802 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 PSMC4P43686 418 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 GSTO1P78417 241 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
CNOT1-215ENST00000569020 MOGSQ13724 837 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 SH3BP5LQ7L8J4 393 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 FASTKD5Q7L8L6 764 aaKnown RBP16.85■□□□□ 0.29
CNOT1-215ENST00000569020 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 SH3TC2Q8TF17 1288 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
CNOT1-215ENST00000569020 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
CNOT1-215ENST00000569020 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
CNOT1-215ENST00000569020 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-215ENST00000569020 MYCP01106 439 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-215ENST00000569020 MAP3K10Q02779 954 aa16.84■□□□□ 0.29
CNOT1-215ENST00000569020 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
CNOT1-215ENST00000569020 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
CNOT1-215ENST00000569020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-215ENST00000569020 ADGRA2Q96PE1 1338 aa16.84■□□□□ 0.29
CNOT1-215ENST00000569020 HTTP42858 3142 aa16.84■□□□□ 0.29
CNOT1-215ENST00000569020 A0A0G2JLL6 359 aaPredicted RBP16.83■□□□□ 0.28
CNOT1-215ENST00000569020 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
CNOT1-215ENST00000569020 ARID4AP29374 1257 aaPredicted RBP16.83■□□□□ 0.28
CNOT1-215ENST00000569020 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.28
CNOT1-215ENST00000569020 PRRT2Q7Z6L0 340 aaPredicted RBP16.83■□□□□ 0.28
CNOT1-215ENST00000569020 RAI14Q9P0K7 980 aa16.83■□□□□ 0.28
CNOT1-215ENST00000569020 PCDH10Q9P2E7 1040 aa16.83■□□□□ 0.28
CNOT1-215ENST00000569020 SRRDQ9UH36 339 aa16.83■□□□□ 0.28
CNOT1-215ENST00000569020 AFG3L2Q9Y4W6 797 aa16.83■□□□□ 0.28
CNOT1-215ENST00000569020 MAST2Q6P0Q8 1798 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
CNOT1-215ENST00000569020 UQCRFS1P1P0C7P4 283 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 CYP2C8P10632 490 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 OSBPP22059 807 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 CTGFP29279 349 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 RHBDL3P58872 404 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 GPAT2Q6NUI2 795 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 GADL1Q6ZQY3 521 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 RAET1EQ8TD07 263 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 NSUN4Q96CB9 384 aaKnown RBP16.82■□□□□ 0.28
CNOT1-215ENST00000569020 TRIM47Q96LD4 638 aa16.82■□□□□ 0.28
CNOT1-215ENST00000569020 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 TBC1D12O60347 775 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 FCGRTP55899 365 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 TBC1D9Q6ZT07 1266 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 TMEM57Q8N5G2 664 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 ZNF384Q8TF68 577 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.81■□□□□ 0.28
CNOT1-215ENST00000569020 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 SLC45A1Q9Y2W3 748 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 CENPFP49454 3210 aa16.81■□□□□ 0.28
CNOT1-215ENST00000569020 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
CNOT1-215ENST00000569020 BCRP11274 1271 aa16.8■□□□□ 0.28
CNOT1-215ENST00000569020 GRK4P32298 578 aa16.8■□□□□ 0.28
CNOT1-215ENST00000569020 MCAMP43121 646 aa16.8■□□□□ 0.28
CNOT1-215ENST00000569020 NOL10Q9BSC4 688 aaKnown RBP16.8■□□□□ 0.28
CNOT1-215ENST00000569020 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-215ENST00000569020 MYO5AQ9Y4I1 1855 aaKnown RBP16.8■□□□□ 0.28
CNOT1-215ENST00000569020 COL2A1P02458 1487 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-215ENST00000569020 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
CNOT1-215ENST00000569020 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
CNOT1-215ENST00000569020 SLURP2P0DP57 97 aa16.79■□□□□ 0.28
CNOT1-215ENST00000569020 OS9Q13438 667 aaPredicted RBP16.79■□□□□ 0.28
CNOT1-215ENST00000569020 CCDC158Q5M9N0 1113 aa16.79■□□□□ 0.28
CNOT1-215ENST00000569020 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
CNOT1-215ENST00000569020 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
CNOT1-215ENST00000569020 UBXN2AP68543 259 aa16.78■□□□□ 0.28
CNOT1-215ENST00000569020 POLA2Q14181 598 aa16.78■□□□□ 0.28
CNOT1-215ENST00000569020 TNNI3KQ59H18 835 aa16.78■□□□□ 0.28
CNOT1-215ENST00000569020 NKX2-3Q8TAU0 364 aa16.78■□□□□ 0.28
CNOT1-215ENST00000569020 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
CNOT1-215ENST00000569020 FPGT-TNNI3KV9GXZ4 949 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms