RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 GPR108Q9NPR9 543 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 ZNF112Q9UJU3 913 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 TRIM17Q9Y577 477 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 MKI67P46013 3256 aaKnown RBP15.82■□□□□ 0.12
TSC2-220ENST00000568238 SURF6O75683 361 aaKnown RBP15.82■□□□□ 0.12
TSC2-220ENST00000568238 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
TSC2-220ENST00000568238 MCAMP43121 646 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 GSTO1P78417 241 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 SP3Q02447 781 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 TNNI3KQ59H18 835 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 CD99L2Q8TCZ2 262 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 ZFYVE28Q9HCC9 887 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 FPGT-TNNI3KV9GXZ4 949 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 CDK5RAP2Q96SN8 1893 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 PTPRFP10586 1907 aa15.82■□□□□ 0.12
TSC2-220ENST00000568238 GPR75-ASB3A0A0A6YYF3 556 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
TSC2-220ENST00000568238 PICALMQ13492 652 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 TTC39AQ5SRH9 613 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 NOL9Q5SY16 702 aaKnown RBP15.81■□□□□ 0.12
TSC2-220ENST00000568238 FOCADQ5VW36 1801 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 TBC1D9Q6ZT07 1266 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 ZSCAN29Q8IWY8 852 aaPredicted RBP15.81■□□□□ 0.12
TSC2-220ENST00000568238 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 NSUN4Q96CB9 384 aaKnown RBP15.81■□□□□ 0.12
TSC2-220ENST00000568238 ZCCHC17Q9NP64 241 aaKnown RBP15.81■□□□□ 0.12
TSC2-220ENST00000568238 RAI14Q9P0K7 980 aa15.81■□□□□ 0.12
TSC2-220ENST00000568238 ZSWIM8A7E2V4 1837 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 PHIPQ8WWQ0 1821 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
TSC2-220ENST00000568238 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 LDHCP07864 332 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 CRBNQ96SW2 442 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 DBNDD2Q9BQY9 259 aa15.8■□□□□ 0.12
TSC2-220ENST00000568238 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
TSC2-220ENST00000568238 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
TSC2-220ENST00000568238 COL2A1P02458 1487 aaPredicted RBP15.79■□□□□ 0.12
TSC2-220ENST00000568238 MAP4K4O95819 1239 aaPredicted RBP15.79■□□□□ 0.12
TSC2-220ENST00000568238 RHBDL3P58872 404 aa15.79■□□□□ 0.12
TSC2-220ENST00000568238 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
TSC2-220ENST00000568238 SH3BP5LQ7L8J4 393 aa15.79■□□□□ 0.12
TSC2-220ENST00000568238 EFCC1Q9HA90 598 aa15.79■□□□□ 0.12
TSC2-220ENST00000568238 LRP2BPQ9P2M1 347 aa15.79■□□□□ 0.12
TSC2-220ENST00000568238 KCNH4Q9UQ05 1017 aa15.79■□□□□ 0.12
TSC2-220ENST00000568238 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
TSC2-220ENST00000568238 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
TSC2-220ENST00000568238 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
TSC2-220ENST00000568238 CEP85Q6P2H3 762 aa15.78■□□□□ 0.12
TSC2-220ENST00000568238 PICK1Q9NRD5 415 aa15.78■□□□□ 0.12
TSC2-220ENST00000568238 SNRKQ9NRH2 765 aa15.78■□□□□ 0.12
TSC2-220ENST00000568238 ZBTB40Q9NUA8 1239 aa15.78■□□□□ 0.12
TSC2-220ENST00000568238 TLR2O60603 784 aa15.77■□□□□ 0.12
TSC2-220ENST00000568238 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
TSC2-220ENST00000568238 ARHGEF6Q15052 776 aa15.77■□□□□ 0.12
TSC2-220ENST00000568238 SCYL3Q8IZE3 742 aa15.77■□□□□ 0.12
TSC2-220ENST00000568238 NOL10Q9BSC4 688 aaKnown RBP15.77■□□□□ 0.12
TSC2-220ENST00000568238 CHMP4BQ9H444 224 aaKnown RBP15.77■□□□□ 0.12
TSC2-220ENST00000568238 DBNLQ9UJU6 430 aaKnown RBP15.77■□□□□ 0.12
TSC2-220ENST00000568238 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.12
TSC2-220ENST00000568238 KIAA0100Q14667 2235 aaKnown RBP15.76■□□□□ 0.11
TSC2-220ENST00000568238 SIPA1L1O43166 1804 aa15.76■□□□□ 0.11
TSC2-220ENST00000568238 CAP1Q01518 475 aa15.76■□□□□ 0.11
TSC2-220ENST00000568238 MAP3K10Q02779 954 aa15.76■□□□□ 0.11
TSC2-220ENST00000568238 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
TSC2-220ENST00000568238 ANKRD23Q86SG2 305 aa15.76■□□□□ 0.11
TSC2-220ENST00000568238 ERC1Q8IUD2 1116 aa15.76■□□□□ 0.11
TSC2-220ENST00000568238 TEX11Q8IYF3 940 aa15.76■□□□□ 0.11
TSC2-220ENST00000568238 ZNF512BQ96KM6 892 aaPredicted RBP15.76■□□□□ 0.11
TSC2-220ENST00000568238 OSBPL5Q9H0X9 879 aaPredicted RBP15.76■□□□□ 0.11
TSC2-220ENST00000568238 CXCL11O14625 94 aa15.75■□□□□ 0.11
TSC2-220ENST00000568238 CYP2E1P05181 493 aaPredicted RBP15.75■□□□□ 0.11
TSC2-220ENST00000568238 TLR7Q9NYK1 1049 aaKnown RBP15.75■□□□□ 0.11
TSC2-220ENST00000568238 EXOC6BQ9Y2D4 811 aa15.75■□□□□ 0.11
TSC2-220ENST00000568238 MGAMO43451 1857 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 PDHXO00330 501 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
TSC2-220ENST00000568238 BAG3O95817 575 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 SLURP2P0DP57 97 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 PTPRAP18433 802 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 ZAP70P43403 619 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 MOGSQ13724 837 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 KIF22Q14807 665 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 EAF2Q96CJ1 260 aaPredicted RBP15.74■□□□□ 0.11
TSC2-220ENST00000568238 CCDC8Q9H0W5 538 aaPredicted RBP15.74■□□□□ 0.11
TSC2-220ENST00000568238 ZHX2Q9Y6X8 837 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 LOC285556D6RIA3 1793 aa15.74■□□□□ 0.11
TSC2-220ENST00000568238 A0A0G2JLL6 359 aaPredicted RBP15.73■□□□□ 0.11
TSC2-220ENST00000568238 TBC1D12O60347 775 aa15.73■□□□□ 0.11
TSC2-220ENST00000568238 IGSF3O75054 1194 aa15.73■□□□□ 0.11
TSC2-220ENST00000568238 PLCG2P16885 1265 aa15.73■□□□□ 0.11
TSC2-220ENST00000568238 LACTBP83111 547 aaPredicted RBP15.73■□□□□ 0.11
TSC2-220ENST00000568238 PRRT2Q7Z6L0 340 aaPredicted RBP15.73■□□□□ 0.11
TSC2-220ENST00000568238 EXOC6Q8TAG9 804 aa15.73■□□□□ 0.11
TSC2-220ENST00000568238 SH3RF3Q8TEJ3 882 aaPredicted RBP15.73■□□□□ 0.11
TSC2-220ENST00000568238 ARMC5Q96C12 935 aa15.73■□□□□ 0.11
TSC2-220ENST00000568238 PARK7Q99497 189 aaKnown RBP15.73■□□□□ 0.11
TSC2-220ENST00000568238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms