RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 GPATCH3Q96I76 525 aa15.79■□□□□ 0.12
CNOT1-213ENST00000568158 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
CNOT1-213ENST00000568158 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-213ENST00000568158 SLURP2P0DP57 97 aa15.78■□□□□ 0.12
CNOT1-213ENST00000568158 PDE6AP16499 860 aa15.78■□□□□ 0.12
CNOT1-213ENST00000568158 PI4K2BQ8TCG2 481 aa15.78■□□□□ 0.12
CNOT1-213ENST00000568158 CCDC102AQ96A19 550 aa15.78■□□□□ 0.12
CNOT1-213ENST00000568158 CLMNQ96JQ2 1002 aa15.78■□□□□ 0.12
CNOT1-213ENST00000568158 PAPPA2Q9BXP8 1791 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 TTC41PQ6P2S7 1318 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 ZNF532Q9HCE3 1301 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 TCRBV5S4A2TA0A5A2 114 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 MX1P20591 662 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 IREB2P48200 963 aaKnown RBP15.77■□□□□ 0.12
CNOT1-213ENST00000568158 NUCB1Q02818 461 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 CHD1LQ86WJ1 897 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 ZSCAN29Q8IWY8 852 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-213ENST00000568158 TGFBRAP1Q8WUH2 860 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 SLC10A4Q96EP9 437 aa15.77■□□□□ 0.12
CNOT1-213ENST00000568158 DOCK2Q92608 1830 aa15.77■□□□□ 0.11
CNOT1-213ENST00000568158 SLC10A3P09131 477 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 PLCG2P16885 1265 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 ADD2P35612 726 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 MAP3K9P80192 1104 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 KIF23Q02241 960 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-213ENST00000568158 RASAL3Q86YV0 1011 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 MAPKAPK5Q8IW41 473 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 STAP2Q9UGK3 403 aa15.76■□□□□ 0.11
CNOT1-213ENST00000568158 MAGEB6P1A0A0J9YX57 407 aa15.75■□□□□ 0.11
CNOT1-213ENST00000568158 ERC2O15083 957 aa15.75■□□□□ 0.11
CNOT1-213ENST00000568158 GLRX3O76003 335 aaKnown RBP15.75■□□□□ 0.11
CNOT1-213ENST00000568158 MAP2K2P36507 400 aa15.75■□□□□ 0.11
CNOT1-213ENST00000568158 PDE1AP54750 535 aa15.75■□□□□ 0.11
CNOT1-213ENST00000568158 MKRN3Q13064 507 aaKnown RBP15.75■□□□□ 0.11
CNOT1-213ENST00000568158 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.75■□□□□ 0.11
CNOT1-213ENST00000568158 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
CNOT1-213ENST00000568158 NOGQ13253 232 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 DCAF15Q66K64 600 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 ANKRD13AQ8IZ07 590 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 KBTBD3Q8NAB2 608 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 ZKSCAN4Q969J2 545 aaPredicted RBP15.74■□□□□ 0.11
CNOT1-213ENST00000568158 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 CSRNP1Q96S65 589 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 RIOK1Q9BRS2 568 aaKnown RBP15.74■□□□□ 0.11
CNOT1-213ENST00000568158 ZNF341Q9BYN7 854 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.74■□□□□ 0.115e-6■□□□□ 9.3
CNOT1-213ENST00000568158 OSBPL5Q9H0X9 879 aaPredicted RBP15.74■□□□□ 0.11
CNOT1-213ENST00000568158 ELP3Q9H9T3 547 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 MAST2Q6P0Q8 1798 aa15.74■□□□□ 0.11
CNOT1-213ENST00000568158 HSPA1AP0DMV8 641 aaKnown RBP15.73■□□□□ 0.11
CNOT1-213ENST00000568158 HSPA1BP0DMV9 641 aaKnown RBP15.73■□□□□ 0.11
CNOT1-213ENST00000568158 INPP5BP32019 993 aa15.73■□□□□ 0.11
CNOT1-213ENST00000568158 USP5P45974 858 aa15.73■□□□□ 0.11
CNOT1-213ENST00000568158 UBE3CQ15386 1083 aa15.73■□□□□ 0.11
CNOT1-213ENST00000568158 TMED8Q6PL24 325 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-213ENST00000568158 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
CNOT1-213ENST00000568158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.73■□□□□ 0.11
CNOT1-213ENST00000568158 ARMT1Q9H993 441 aa15.73■□□□□ 0.11
CNOT1-213ENST00000568158 WBP1LQ9NX94 342 aa15.73■□□□□ 0.11
CNOT1-213ENST00000568158 SAP30BPQ9UHR5 308 aaKnown RBP15.73■□□□□ 0.11
CNOT1-213ENST00000568158 RPAP1Q9BWH6 1393 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-213ENST00000568158 MAP3K10Q02779 954 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 SPRYD7Q5W111 196 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 LCORLQ8N3X6 602 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 WRNIP1Q96S55 665 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 PUS7LQ9H0K6 701 aaKnown RBP15.72■□□□□ 0.11
CNOT1-213ENST00000568158 ZNF112Q9UJU3 913 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 PALD1Q9ULE6 856 aa15.72■□□□□ 0.11
CNOT1-213ENST00000568158 CDK5RAP2Q96SN8 1893 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 FLT1P17948 1338 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 UNCXA6NJT0 531 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 FAM196BA6NMK8 535 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
CNOT1-213ENST00000568158 PRKAB2O43741 272 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 GJA5P36382 358 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 MAP2K1Q02750 393 aaPredicted RBP15.71■□□□□ 0.11
CNOT1-213ENST00000568158 VGLL4Q14135 290 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
CNOT1-213ENST00000568158 PHF20L1A8MW92 1017 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 MBD4O95243 580 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 PDE4AP27815 886 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 CERS3Q8IU89 383 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 SDR42E1Q8WUS8 393 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
CNOT1-213ENST00000568158 CSADQ9Y600 493 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 SNCAIPQ9Y6H5 919 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 ATRNL1Q5VV63 1379 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 MYH7P12883 1935 aa15.7■□□□□ 0.1
CNOT1-213ENST00000568158 FOXN1O15353 648 aa15.69■□□□□ 0.1
CNOT1-213ENST00000568158 TBC1D12O60347 775 aa15.69■□□□□ 0.1
CNOT1-213ENST00000568158 OPTNQ96CV9 577 aa15.69■□□□□ 0.1
CNOT1-213ENST00000568158 FSD1Q9BTV5 496 aa15.69■□□□□ 0.1
CNOT1-213ENST00000568158 CRNKL1Q9BZJ0 848 aaKnown RBP15.69■□□□□ 0.1
CNOT1-213ENST00000568158 DHX36Q9H2U1 1008 aaKnown RBP15.69■□□□□ 0.1
CNOT1-213ENST00000568158 PI4KBQ9UBF8 816 aa15.69■□□□□ 0.1
CNOT1-213ENST00000568158 CENPBP07199 599 aaPredicted RBP15.68■□□□□ 0.1
CNOT1-213ENST00000568158 RRP1BQ14684 758 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms