RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
SMG1-213ENST00000567737 SPTBN5Q9NRC6 3674 aaKnown RBP17.52■□□□□ 0.39
SMG1-213ENST00000567737 COL2A1P02458 1487 aaPredicted RBP17.51■□□□□ 0.39
SMG1-213ENST00000567737 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
SMG1-213ENST00000567737 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
SMG1-213ENST00000567737 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
SMG1-213ENST00000567737 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
SMG1-213ENST00000567737 VPS37DQ86XT2 251 aa17.51■□□□□ 0.39
SMG1-213ENST00000567737 MRIQ9BWK5 157 aa17.51■□□□□ 0.39
SMG1-213ENST00000567737 MAST3O60307 1309 aa17.5■□□□□ 0.39
SMG1-213ENST00000567737 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMG1-213ENST00000567737 APOBEC3HQ6NTF7 200 aaKnown RBP17.5■□□□□ 0.39
SMG1-213ENST00000567737 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
SMG1-213ENST00000567737 FAM151AQ8WW52 585 aa17.5■□□□□ 0.39
SMG1-213ENST00000567737 ZNF594Q96JF6 807 aaPredicted RBP17.5■□□□□ 0.39
SMG1-213ENST00000567737 PFASO15067 1338 aa17.49■□□□□ 0.39
SMG1-213ENST00000567737 EYSQ5T1H1 3165 aa17.49■□□□□ 0.39
SMG1-213ENST00000567737 FOXO4P98177 505 aa17.49■□□□□ 0.39
SMG1-213ENST00000567737 LBHD1Q9BQE6 289 aaPredicted RBP17.49■□□□□ 0.39
SMG1-213ENST00000567737 IQSEC3Q9UPP2 1182 aaPredicted RBP17.49■□□□□ 0.39
SMG1-213ENST00000567737 ZHX2Q9Y6X8 837 aa17.49■□□□□ 0.39
SMG1-213ENST00000567737 TNFRSF10AO00220 468 aa17.48■□□□□ 0.39
SMG1-213ENST00000567737 PLA2G5P39877 138 aa17.48■□□□□ 0.39
SMG1-213ENST00000567737 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMG1-213ENST00000567737 TCP10Q12799 353 aa17.48■□□□□ 0.39
SMG1-213ENST00000567737 FAM110CQ1W6H9 321 aa17.48■□□□□ 0.39
SMG1-213ENST00000567737 LINS1Q8NG48 757 aa17.48■□□□□ 0.39
SMG1-213ENST00000567737 PICK1Q9NRD5 415 aa17.48■□□□□ 0.39
SMG1-213ENST00000567737 TRIM32Q13049 653 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 G2E3Q7L622 706 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 SCYL3Q8IZE3 742 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 TSPYL6Q8N831 410 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 FAM122AQ96E09 287 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 RAPGEFL1Q9UHV5 662 aa17.47■□□□□ 0.39
SMG1-213ENST00000567737 RALBP1Q15311 655 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 CAVIN4Q5BKX8 364 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 HHIPL2Q6UWX4 724 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 DNAAF4Q8WXU2 420 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 MYLIPQ8WY64 445 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 SPOCK2Q92563 424 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 PNMA3Q9UL41 463 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 SUGT1Q9Y2Z0 365 aa17.46■□□□□ 0.39
SMG1-213ENST00000567737 COL6A1P12109 1028 aa17.45■□□□□ 0.38
SMG1-213ENST00000567737 FOSL2P15408 326 aa17.45■□□□□ 0.38
SMG1-213ENST00000567737 PTPRAP18433 802 aa17.45■□□□□ 0.38
SMG1-213ENST00000567737 TJAP1Q5JTD0 557 aa17.45■□□□□ 0.38
SMG1-213ENST00000567737 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
SMG1-213ENST00000567737 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
SMG1-213ENST00000567737 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
SMG1-213ENST00000567737 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
SMG1-213ENST00000567737 AGTPBP1Q9UPW5 1226 aa17.44■□□□□ 0.38
SMG1-213ENST00000567737 PRUNE2Q8WUY3 3088 aa17.44■□□□□ 0.38
SMG1-213ENST00000567737 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
SMG1-213ENST00000567737 TMEM265A0A087WTH1 108 aa17.43■□□□□ 0.38
SMG1-213ENST00000567737 FLIIQ13045 1269 aa17.43■□□□□ 0.38
SMG1-213ENST00000567737 TRIB2Q92519 343 aa17.43■□□□□ 0.38
SMG1-213ENST00000567737 TRIM75PA6NK02 468 aa17.42■□□□□ 0.38
SMG1-213ENST00000567737 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
SMG1-213ENST00000567737 MAP3K21Q5TCX8 1036 aa17.42■□□□□ 0.38
SMG1-213ENST00000567737 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
SMG1-213ENST00000567737 GJD2Q9UKL4 321 aa17.42■□□□□ 0.38
SMG1-213ENST00000567737 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
SMG1-213ENST00000567737 GCLCP48506 637 aaPredicted RBP17.41■□□□□ 0.38
SMG1-213ENST00000567737 NFIAQ12857 509 aa17.41■□□□□ 0.38
SMG1-213ENST00000567737 EPHA10Q5JZY3 1008 aa17.41■□□□□ 0.38
SMG1-213ENST00000567737 CDC42EP5Q6NZY7 148 aa17.41■□□□□ 0.38
SMG1-213ENST00000567737 MROH5Q6ZUA9 1318 aa17.41■□□□□ 0.38
SMG1-213ENST00000567737 AK9Q5TCS8 1911 aa17.41■□□□□ 0.38
SMG1-213ENST00000567737 DOCK3Q8IZD9 2030 aa17.4■□□□□ 0.38
SMG1-213ENST00000567737 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
SMG1-213ENST00000567737 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
SMG1-213ENST00000567737 CYP2B6P20813 491 aa17.39■□□□□ 0.37
SMG1-213ENST00000567737 TREML2Q5T2D2 321 aa17.39■□□□□ 0.37
SMG1-213ENST00000567737 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
SMG1-213ENST00000567737 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
SMG1-213ENST00000567737 TTC28Q96AY4 2481 aa17.38■□□□□ 0.37
SMG1-213ENST00000567737 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
SMG1-213ENST00000567737 SMAD3P84022 425 aaKnown RBP17.38■□□□□ 0.37
SMG1-213ENST00000567737 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
SMG1-213ENST00000567737 TTYH1Q9H313 450 aaPredicted RBP17.38■□□□□ 0.37
SMG1-213ENST00000567737 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
SMG1-213ENST00000567737 APAF1O14727 1248 aa17.37■□□□□ 0.37
SMG1-213ENST00000567737 CTNND1O60716 968 aaKnown RBP17.37■□□□□ 0.37
SMG1-213ENST00000567737 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMG1-213ENST00000567737 SHHQ15465 462 aa17.37■□□□□ 0.37
SMG1-213ENST00000567737 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
SMG1-213ENST00000567737 PIP4P2Q8N4L2 257 aa17.37■□□□□ 0.37
SMG1-213ENST00000567737 PROCA1Q8NCQ7 364 aaPredicted RBP17.37■□□□□ 0.37
SMG1-213ENST00000567737 SOCS4Q8WXH5 440 aa17.37■□□□□ 0.37
SMG1-213ENST00000567737 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
SMG1-213ENST00000567737 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
SMG1-213ENST00000567737 SENP6Q9GZR1 1112 aaPredicted RBP17.37■□□□□ 0.37
SMG1-213ENST00000567737 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
SMG1-213ENST00000567737 ATRNL1Q5VV63 1379 aa17.37■□□□□ 0.37
SMG1-213ENST00000567737 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
SMG1-213ENST00000567737 CACNB2Q08289 660 aaPredicted RBP17.36■□□□□ 0.37
SMG1-213ENST00000567737 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms