RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 ATRNL1Q5VV63 1379 aa16.13■□□□□ 0.17
NEIL1-213ENST00000567393 MX1P20591 662 aa16.13■□□□□ 0.17
NEIL1-213ENST00000567393 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
NEIL1-213ENST00000567393 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
NEIL1-213ENST00000567393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.13■□□□□ 0.17
NEIL1-213ENST00000567393 SLC10A4Q96EP9 437 aa16.13■□□□□ 0.17
NEIL1-213ENST00000567393 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
NEIL1-213ENST00000567393 BEGAINQ9BUH8 593 aa16.13■□□□□ 0.17
NEIL1-213ENST00000567393 CSADQ9Y600 493 aa16.13■□□□□ 0.17
NEIL1-213ENST00000567393 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
NEIL1-213ENST00000567393 GLRX3O76003 335 aaKnown RBP16.12■□□□□ 0.17
NEIL1-213ENST00000567393 MAP3K9P80192 1104 aa16.12■□□□□ 0.17
NEIL1-213ENST00000567393 KIF23Q02241 960 aaPredicted RBP16.12■□□□□ 0.17
NEIL1-213ENST00000567393 MIGA1Q8NAN2 632 aa16.12■□□□□ 0.17
NEIL1-213ENST00000567393 CLMNQ96JQ2 1002 aa16.12■□□□□ 0.17
NEIL1-213ENST00000567393 WRNIP1Q96S55 665 aa16.12■□□□□ 0.17
NEIL1-213ENST00000567393 OSBPL5Q9H0X9 879 aaPredicted RBP16.12■□□□□ 0.17
NEIL1-213ENST00000567393 ZNF532Q9HCE3 1301 aa16.12■□□□□ 0.17
NEIL1-213ENST00000567393 CA12O43570 354 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 IGHDP01880 384 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
NEIL1-213ENST00000567393 VGLL4Q14135 290 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 TSHZ3Q63HK5 1081 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.11■□□□□ 0.17
NEIL1-213ENST00000567393 MIGA2Q7L4E1 593 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 SH3BP5LQ7L8J4 393 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
NEIL1-213ENST00000567393 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
NEIL1-213ENST00000567393 SALL3Q9BXA9 1300 aa16.11■□□□□ 0.17
NEIL1-213ENST00000567393 MAGEB6P1A0A0J9YX57 407 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 DDTLA6NHG4 134 aaPredicted RBP16.1■□□□□ 0.17
NEIL1-213ENST00000567393 ADD2P35612 726 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 DYNLL1P63167 89 aaKnown RBP16.1■□□□□ 0.17
NEIL1-213ENST00000567393 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 TGFBRAP1Q8WUH2 860 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 WNK4Q96J92 1243 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 ZIC5Q96T25 663 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 RIOK1Q9BRS2 568 aaKnown RBP16.1■□□□□ 0.17
NEIL1-213ENST00000567393 FLT1P17948 1338 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
NEIL1-213ENST00000567393 USP5P45974 858 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 MAP3K10Q02779 954 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 NUCB1Q02818 461 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 SREBF2Q12772 1141 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
NEIL1-213ENST00000567393 CHD1LQ86WJ1 897 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 MAPKAPK5Q8IW41 473 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 KBTBD3Q8NAB2 608 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 ELP3Q9H9T3 547 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 ZNF112Q9UJU3 913 aa16.09■□□□□ 0.17
NEIL1-213ENST00000567393 TBC1D12O60347 775 aa16.08■□□□□ 0.16
NEIL1-213ENST00000567393 CTCFP49711 727 aaPredicted RBP16.08■□□□□ 0.16
NEIL1-213ENST00000567393 MKRN3Q13064 507 aaKnown RBP16.08■□□□□ 0.16
NEIL1-213ENST00000567393 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.16
NEIL1-213ENST00000567393 OPTNQ96CV9 577 aa16.08■□□□□ 0.16
NEIL1-213ENST00000567393 CRNKL1Q9BZJ0 848 aaKnown RBP16.08■□□□□ 0.16
NEIL1-213ENST00000567393 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.08■□□□□ 0.16
NEIL1-213ENST00000567393 SNCAIPQ9Y6H5 919 aa16.08■□□□□ 0.16
NEIL1-213ENST00000567393 MANSC4A6NHS7 340 aaPredicted RBP16.07■□□□□ 0.16
NEIL1-213ENST00000567393 SPDYE5A6NIY4 337 aa16.07■□□□□ 0.16
NEIL1-213ENST00000567393 FOXN1O15353 648 aa16.07■□□□□ 0.16
NEIL1-213ENST00000567393 ZFYP08048 801 aaPredicted RBP16.07■□□□□ 0.16
NEIL1-213ENST00000567393 PDE1AP54750 535 aa16.07■□□□□ 0.16
NEIL1-213ENST00000567393 NOL9Q5SY16 702 aaKnown RBP16.07■□□□□ 0.16
NEIL1-213ENST00000567393 ERO1BQ86YB8 467 aa16.07■□□□□ 0.16
NEIL1-213ENST00000567393 ZKSCAN4Q969J2 545 aaPredicted RBP16.07■□□□□ 0.16
NEIL1-213ENST00000567393 SAGE1Q9NXZ1 904 aa16.07■□□□□ 0.16
NEIL1-213ENST00000567393 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
NEIL1-213ENST00000567393 HERC5Q9UII4 1024 aaKnown RBP16.07■□□□□ 0.16
NEIL1-213ENST00000567393 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
NEIL1-213ENST00000567393 INPP5BP32019 993 aa16.06■□□□□ 0.16
NEIL1-213ENST00000567393 INHBEP58166 350 aa16.06■□□□□ 0.16
NEIL1-213ENST00000567393 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 MBD4O95243 580 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 GJA5P36382 358 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 TM4SF4P48230 202 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
NEIL1-213ENST00000567393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.05■□□□□ 0.16
NEIL1-213ENST00000567393 RNF113AO15541 343 aaKnown RBP16.04■□□□□ 0.16
NEIL1-213ENST00000567393 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
NEIL1-213ENST00000567393 HSPA8P11142 646 aaKnown RBP16.04■□□□□ 0.16
NEIL1-213ENST00000567393 GTF2A2P52657 109 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 PPATQ06203 517 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 PPIL2Q13356 520 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
NEIL1-213ENST00000567393 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
NEIL1-213ENST00000567393 APPBP2Q92624 585 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 FSD1Q9BTV5 496 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 TRIM34Q9BYJ4 488 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 ARMT1Q9H993 441 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 PICK1Q9NRD5 415 aa16.04■□□□□ 0.16
NEIL1-213ENST00000567393 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms