RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
CLN6-208ENST00000567060 TSHZ3Q63HK5 1081 aa20.2■□□□□ 0.82
CLN6-208ENST00000567060 NOL10Q9BSC4 688 aaKnown RBP20.2■□□□□ 0.82
CLN6-208ENST00000567060 DAGLAQ9Y4D2 1042 aa20.2■□□□□ 0.82
CLN6-208ENST00000567060 BRCA2P51587 3418 aa20.2■□□□□ 0.82
CLN6-208ENST00000567060 GPR75-ASB3A0A0A6YYF3 556 aa20.19■□□□□ 0.82
CLN6-208ENST00000567060 BAG3O95817 575 aa20.19■□□□□ 0.82
CLN6-208ENST00000567060 TNFAIP1Q13829 316 aa20.19■□□□□ 0.82
CLN6-208ENST00000567060 FKBP1CQ5VVH2 108 aa20.19■□□□□ 0.82
CLN6-208ENST00000567060 APOBEC3FQ8IUX4 373 aaKnown RBP20.19■□□□□ 0.82
CLN6-208ENST00000567060 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
CLN6-208ENST00000567060 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
CLN6-208ENST00000567060 MYO5AQ9Y4I1 1855 aaKnown RBP20.19■□□□□ 0.82
CLN6-208ENST00000567060 PPP4CP60510 307 aa20.18■□□□□ 0.82
CLN6-208ENST00000567060 TTLL12Q14166 644 aaPredicted RBP20.18■□□□□ 0.82
CLN6-208ENST00000567060 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
CLN6-208ENST00000567060 SLC9C2Q5TAH2 1124 aa20.18■□□□□ 0.82
CLN6-208ENST00000567060 APOBEC3HQ6NTF7 200 aaKnown RBP20.18■□□□□ 0.82
CLN6-208ENST00000567060 FBXO46Q6PJ61 603 aaPredicted RBP20.18■□□□□ 0.82
CLN6-208ENST00000567060 TMOD2Q9NZR1 351 aa20.18■□□□□ 0.82
CLN6-208ENST00000567060 PDE6AP16499 860 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 ADD2P35612 726 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 SPDYE2Q495Y8 402 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 LDLRAD1Q5T700 205 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 TTC22Q5TAA0 569 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 MAGEB6Q8N7X4 407 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 ZNF384Q8TF68 577 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 PRMT6Q96LA8 375 aaPredicted RBP20.17■□□□□ 0.82
CLN6-208ENST00000567060 PPP2R3BQ9Y5P8 575 aa20.17■□□□□ 0.82
CLN6-208ENST00000567060 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
CLN6-208ENST00000567060 CYP7A1P22680 504 aa20.16■□□□□ 0.82
CLN6-208ENST00000567060 EDC3Q96F86 508 aaKnown RBP20.16■□□□□ 0.82
CLN6-208ENST00000567060 FSD1Q9BTV5 496 aa20.16■□□□□ 0.82
CLN6-208ENST00000567060 HIP1O00291 1037 aa20.15■□□□□ 0.82
CLN6-208ENST00000567060 FKTNO75072 461 aa20.15■□□□□ 0.82
CLN6-208ENST00000567060 BTDP43251 543 aa20.15■□□□□ 0.82
CLN6-208ENST00000567060 TNNI2P48788 182 aa20.15■□□□□ 0.82
CLN6-208ENST00000567060 PRKG1Q13976 671 aa20.15■□□□□ 0.82
CLN6-208ENST00000567060 ZNF532Q9HCE3 1301 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 TCRBV5S4A2TA0A5A2 114 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
CLN6-208ENST00000567060 SREBF2Q12772 1141 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 SPRYD7Q5W111 196 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 FAM83AQ86UY5 434 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 ZNF70Q9UC06 446 aaPredicted RBP20.14■□□□□ 0.81
CLN6-208ENST00000567060 FZD1Q9UP38 647 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 AK9Q5TCS8 1911 aa20.14■□□□□ 0.81
CLN6-208ENST00000567060 NF2P35240 595 aa20.13■□□□□ 0.81
CLN6-208ENST00000567060 CDC42EP5Q6NZY7 148 aa20.13■□□□□ 0.81
CLN6-208ENST00000567060 APPBP2Q92624 585 aa20.13■□□□□ 0.81
CLN6-208ENST00000567060 IDI2Q9BXS1 227 aa20.13■□□□□ 0.81
CLN6-208ENST00000567060 TDRD3Q9H7E2 651 aaKnown RBP20.13■□□□□ 0.81
CLN6-208ENST00000567060 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
CLN6-208ENST00000567060 ARMC9Q7Z3E5 817 aa20.12■□□□□ 0.81
CLN6-208ENST00000567060 USP40Q9NVE5 1235 aa20.12■□□□□ 0.81
CLN6-208ENST00000567060 RPAP1Q9BWH6 1393 aaPredicted RBP20.11■□□□□ 0.81
CLN6-208ENST00000567060 ENTPD3O75355 529 aa20.11■□□□□ 0.81
CLN6-208ENST00000567060 RHBDL3P58872 404 aa20.11■□□□□ 0.81
CLN6-208ENST00000567060 RILPL2Q969X0 211 aa20.11■□□□□ 0.81
CLN6-208ENST00000567060 MAGEB6P1A0A0J9YX57 407 aa20.1■□□□□ 0.81
CLN6-208ENST00000567060 GSPT1P15170 499 aaKnown RBP20.1■□□□□ 0.81
CLN6-208ENST00000567060 ADGRA1Q86SQ6 560 aa20.1■□□□□ 0.81
CLN6-208ENST00000567060 RIOK1Q9BRS2 568 aaKnown RBP20.1■□□□□ 0.81
CLN6-208ENST00000567060 HELLSQ9NRZ9 838 aa20.1■□□□□ 0.81
CLN6-208ENST00000567060 AATFQ9NY61 560 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLN6-208ENST00000567060 ANGEL1Q9UNK9 670 aaKnown RBP20.1■□□□□ 0.81
CLN6-208ENST00000567060 PCDHAC2Q9Y5I4 1007 aa20.1■□□□□ 0.81
CLN6-208ENST00000567060 COL2A1P02458 1487 aaPredicted RBP20.1■□□□□ 0.81
CLN6-208ENST00000567060 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
CLN6-208ENST00000567060 HOOK2Q96ED9 719 aa20.09■□□□□ 0.81
CLN6-208ENST00000567060 VEZTQ9HBM0 779 aa20.09■□□□□ 0.81
CLN6-208ENST00000567060 CLRN2A0PK11 232 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 POTEFA5A3E0 1075 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 GNAT2P19087 354 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 SDSP20132 328 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 MAP3K11Q16584 847 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 OTOP1Q7RTM1 612 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 IFNL1Q8IU54 200 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 TEX11Q8IYF3 940 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 FAM151AQ8WW52 585 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 CLMNQ96JQ2 1002 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 CRNKL1Q9BZJ0 848 aaKnown RBP20.08■□□□□ 0.81
CLN6-208ENST00000567060 DEFB129Q9H1M3 183 aa20.08■□□□□ 0.81
CLN6-208ENST00000567060 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLN6-208ENST00000567060 WDHD1O75717 1129 aaPredicted RBP20.07■□□□□ 0.8
CLN6-208ENST00000567060 ALDH1A1P00352 501 aa20.07■□□□□ 0.8
CLN6-208ENST00000567060 RGS3P49796 1198 aa20.07■□□□□ 0.8
CLN6-208ENST00000567060 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
CLN6-208ENST00000567060 INHBEP58166 350 aa20.07■□□□□ 0.8
CLN6-208ENST00000567060 SLC10A4Q96EP9 437 aa20.07■□□□□ 0.8
CLN6-208ENST00000567060 TAOK2Q9UL54 1235 aa20.07■□□□□ 0.8
CLN6-208ENST00000567060 TRIM17Q9Y577 477 aa20.07■□□□□ 0.8
CLN6-208ENST00000567060 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
CLN6-208ENST00000567060 MANSC4A6NHS7 340 aaPredicted RBP20.06■□□□□ 0.8
CLN6-208ENST00000567060 SUPT20HL1Q3ZLR7 823 aa20.06■□□□□ 0.8
CLN6-208ENST00000567060 MIGA1Q8NAN2 632 aa20.06■□□□□ 0.8
CLN6-208ENST00000567060 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
CLN6-208ENST00000567060 RAD50Q92878 1312 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 RASA3Q14644 834 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms