RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 TM4SF20Q53R12 229 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 EEPD1Q7L9B9 569 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 UBE2OQ9C0C9 1292 aaKnown RBP7.92□□□□□ -1.14
KARS-208ENST00000566772 LACRTQ9GZZ8 138 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 ADAM19Q9H013 955 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 SH2B1Q9NRF2 756 aaPredicted RBP7.92□□□□□ -1.14
KARS-208ENST00000566772 GABBR1Q9UBS5 961 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 ATP8A1Q9Y2Q0 1164 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 RIPOR2Q9Y4F9 1068 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 CORINQ9Y5Q5 1042 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 LTBP3Q9NS15 1303 aa7.92□□□□□ -1.14
KARS-208ENST00000566772 SLC35F4A4IF30 521 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 GFRA2O00451 464 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 ADCY3O60266 1144 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 MAN1A2O60476 641 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 ACRP10323 421 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 CPB1P15086 417 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 PTPRAP18433 802 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 PTSQ03393 145 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 CBX2Q14781 532 aaPredicted RBP7.91□□□□□ -1.14
KARS-208ENST00000566772 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 HGSNATQ68CP4 663 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 SCARA3Q6AZY7 606 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 VHLLQ6RSH7 139 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 UNC5AQ6ZN44 842 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 THNSL2Q86YJ6 484 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 TRIM22Q8IYM9 498 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 MICALL1Q8N3F8 863 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 NINJ1Q92982 152 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 CEP89Q96ST8 783 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 THRAP3Q9Y2W1 955 aaKnown RBP7.91□□□□□ -1.14
KARS-208ENST00000566772 PRR36Q9H6K5 1346 aa7.91□□□□□ -1.14
KARS-208ENST00000566772 LOC102724159A0A0B4J2E5 919 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 CCDC194A0A1B0GVG4 234 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 TPD52L2O43399 206 aaKnown RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 KCNQ2O43526 872 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 AVPP01185 164 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 GSTP1P09211 210 aaKnown RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 FGFR3P22607 806 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 CTBSQ01459 385 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 PWP2Q15269 919 aaKnown RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 PCSK7Q16549 785 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 BRDTQ58F21 947 aaPredicted RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 FAM182BQ5T319 152 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 RAVER1Q8IY67 606 aaKnown RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 NIM1KQ8IY84 436 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 ZBTB38Q8NAP3 1195 aaPredicted RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 CHAC2Q8WUX2 184 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 GTPBP3Q969Y2 492 aaKnown RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 MFSD3Q96ES6 412 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 ZC3H12CQ9C0D7 883 aaKnown RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 ATXN7L1Q9ULK2 861 aaPredicted RBP7.9□□□□□ -1.14
KARS-208ENST00000566772 PRR12Q9ULL5 1215 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 PCDHA4Q9UN74 947 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 TRIM33Q9UPN9 1127 aa7.9□□□□□ -1.14
KARS-208ENST00000566772 PLEKHD1A6NEE1 506 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 SOX1O00570 391 aaPredicted RBP7.89□□□□□ -1.15
KARS-208ENST00000566772 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
KARS-208ENST00000566772 IKBKEQ14164 716 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 INPP5AQ14642 412 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 NCAPHQ15003 741 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 PERM1Q5SV97 790 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 SYT9Q86SS6 491 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 FAM35AQ86V20 835 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 DDX42Q86XP3 938 aaKnown RBP eCLIP7.89□□□□□ -1.15
KARS-208ENST00000566772 TAB3Q8N5C8 712 aaPredicted RBP7.89□□□□□ -1.15
KARS-208ENST00000566772 UBR7Q8N806 425 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 ATG4CQ96DT6 458 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 SLC26A8Q96RN1 970 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
KARS-208ENST00000566772 A0A087X0B3 334 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 FAM86C2PA6NEL3 165 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 SLC22A31A6NKX4 558 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 SUSD5O60279 629 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 PEX14O75381 377 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 NME1P15531 152 aaKnown RBP7.88□□□□□ -1.15
KARS-208ENST00000566772 STAT3P40763 770 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.15
KARS-208ENST00000566772 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 LONRF2Q1L5Z9 754 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 SLC10A6Q3KNW5 377 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 WIPI1Q5MNZ9 446 aaPredicted RBP7.88□□□□□ -1.15
KARS-208ENST00000566772 FOXB2Q5VYV0 432 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 OVOS1Q6IE37 1185 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 KIAA1211LQ6NV74 962 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 DDX54Q8TDD1 881 aaKnown RBP7.88□□□□□ -1.15
KARS-208ENST00000566772 SGSM3Q96HU1 749 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 PSMD1Q99460 953 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 SMG9Q9H0W8 520 aaKnown RBP7.88□□□□□ -1.15
KARS-208ENST00000566772 REV1Q9UBZ9 1251 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 SLC12A7Q9Y666 1083 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
KARS-208ENST00000566772 DNAJA2O60884 412 aa7.87□□□□□ -1.15
KARS-208ENST00000566772 L1CAMP32004 1257 aa7.87□□□□□ -1.15
KARS-208ENST00000566772 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms